Pinned Repositories
awesome-nextflow
A curated list of nextflow based pipelines
hello
Classic hello world script in Nextflow language
k8s-fuse-plugin
Kubernetes device plugin for using /dev/fuse without privileged flag
nextflow
A DSL for data-driven computational pipelines
nf-validation
Params validation plugin for Nextflow pipelines
patterns
A curated collection of Nextflow implementation patterns
plugins
Nextflow plugins index repository
rnaseq-nf
A proof of concept of RNAseq pipeline
rnatoy
A proof of concept RNA-Seq pipeline with Nextflow
training
Nextflow training material
nextflow-io's Repositories
nextflow-io/nextflow
A DSL for data-driven computational pipelines
nextflow-io/training
Nextflow training material
nextflow-io/rnaseq-nf
A proof of concept of RNAseq pipeline
nextflow-io/nf-validation
Params validation plugin for Nextflow pipelines
nextflow-io/vscode-language-nextflow
Nextflow language support for Visual Studio Editor
nextflow-io/nf-prov
nextflow-io/hyperopt
Nextflow pipeline for hyperparameter optimization of machine learning models
nextflow-io/hello
Classic hello world script in Nextflow language
nextflow-io/nf-gpt
Experimental plugin to integrate GPT like prompt into Nextflow
nextflow-io/nf-co2footprint
[WIP] A Nextflow plugin to estimate the CO2 footprint of pipeline runs.
nextflow-io/nf-hello
Nextflow plugin implementation skeleton
nextflow-io/nf-ffq
Nextflow plugin to fetch fastq samples via ffq
nextflow-io/website
Nextflow public web site
nextflow-io/nf-schema
Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines
nextflow-io/nf-azure
Azure cloud plugin for Nextflow
nextflow-io/summit
nextflow-io/summit-website
nextflow-io/gpt-prompt-engineer
Exploring workflow for prompt engineer with Nextflow
nextflow-io/nf-amazon
Amazon Web Services plugin for Nextflow
nextflow-io/nf-ignite
nextflow-io/nf-nomad
[WIP] Hashicorp Nomad executor plugin for Nextflow
nextflow-io/nf-tower
Nextflow plugin providing the support for Tower
nextflow-io/nf-wave
Wave provisioning containers plugin for Nextflow
nextflow-io/plugins
Nextflow plugins index repository
nextflow-io/nf-console
Console plugin for Nextflow
nextflow-io/.well-known
Repo to prevent Chrome web lookalike warnings
nextflow-io/nf-cloudcache
Plugin implementing a cache metadata DB over cloud object storage
nextflow-io/nf-codecommit
Amazon CodeCommit plugin for Nextflow
nextflow-io/nf-ga4gh
GA4GH plugin for Nextflow
nextflow-io/nf-google
Nextflow plugin providing the support for Google cloud