nfdi4plants/ARCCommander

Issues

• [Feature Request] `arc init` should also create parentfolder if not already existing

  #165 opened a year ago
  3

• Only the pointers and not the files are downloaded when using arc sync [BUG]

  #164 opened 2 years ago
  3

• [Feature Request] Add instruction on how to get access token to wiki

  #163 opened 2 years ago
  3

• [Feature Request] improve console output of setgituser

  #162 opened a year ago
  0

• [Feature Request] Change of two attribute field names in investigation.xlsx and study.xlsx

  #161 opened 2 years ago
  1

• [BUG] assay outputs format of ARC.json file incorrect

  #154 opened 2 years ago
  2

• [BUG] inputs in JSON output file are duplicated on occasion

  #153 opened 2 years ago
  1

• [BUG] arc assay add fails in a large arc

  #152 opened 2 years ago
  4

• arcCommand conda package (aka delivering arcCommander with supporting binaries in an easy and portable manner)

  #151 opened 2 years ago
  0

• [Feature Request] Naming consistency suggestion in the .xlsx files

  #150 opened 2 years ago
  1

• [Feature Request] Scattered arc commander tutorials

  #149 opened 2 years ago
  3

• add arc export to wiki

  #148 opened 2 years ago
  1

• [Bug] `arc sync`

  #147 opened a year ago
  2

• [BUG] Assays don't get registered in the isa.study.xlsx file, only in the isa.investigation.xlsx file

  #145 opened 2 years ago
  1

• [Feature Request] Include common junk items in standard .gitignore

  #143 opened 2 years ago
  1

• [Feature Request] check study and assay identifier for unsupported characters

  #142 opened 2 years ago
  0

• [BUG] arc export duplicates assay into new study

  #141 opened a year ago
  2

• [BUG] `arc i edit` deletes complete Investigation when editing an Investigation with a Comment field

  #140 opened a year ago
  0

• [BUG] ARC Commander creates new remote repository without using "arc sync -f"

  #139 opened 2 years ago
  0

• [BUG] "arc config edit -g" reports error

  #138 opened a year ago
  0

• [Feature Request] Use custom error messages

  #135 opened 2 years ago
  1

• [Feature Request] Make use of main arguments

  #134 opened 2 years ago
  1

• [BUG] OS-specific file linking

  #133 opened a year ago
  2

• [Feature Request] Extend documentation for "6. ARC Synchronization"

  #132 opened 2 years ago
  0

• [BUG] Access token retrieval does not work

  #131 opened 2 years ago
  4

• [BUG] Editing local config with "arc config edit -l" does not work

  #129 opened a year ago
  0

• [BUG] issue with old git version (?)

  #128 opened 2 years ago
  6

• [Feature Request] warning for long assay / study titles

  #126 opened 2 years ago
  2

• [BUG] .gitattributes file is not tracked by arc sync

  #125 opened 2 years ago
  0

• [BUG] buggy arc update after upgrade to arc_v1.1

  #124 opened a year ago
  1

• [BUG] study cannot be deleted

  #121 opened 2 years ago
  3

• [Feature Request] Latest and OS tags for releases

  #116 opened 2 years ago
  3

• [Feature Request] Release process automization

  #114 opened 3 years ago
  1

• Rename -p argument in export functions

  #111 opened 3 years ago
  0

• [BUG] External tool execution does not work with -p

  #110 opened 3 months ago
  0

• [BUG] arc export does not work on samplearc_rnaseq

  #109 opened 2 years ago
  3

• [BUG] investigation file deviates from ISA

  #107 opened 10 months ago
  2

• [Feature Request] arc get "dry run"

  #106 opened 2 years ago
  1

• [BUG] git-lfs related Smudge error downloading arc-added lfs

  #105 opened 3 years ago
  11

• [Wiki] Provide existing arc for example command `arc get`

  #104 opened 3 years ago
  2

• [Feature Request] Log into system temp folder

  #102 opened 3 years ago
  3

• [Feature Request] Login to Gitlab by accessing an access token service

  #100 opened 2 years ago
  1

• [Feature Request] Show AC version

  #99 opened 3 years ago
  1

• [BUG] minor: arc sync default commit message

  #97 opened a year ago
  4

• [BUG] arc sync overwrites existing .gitattributes

  #96 opened 2 years ago
  7

• [BUG] Prompt re-registration for assay when linked study is removed

  #94 opened 3 years ago
  4

• [BUG] Minor typo in error message during arc s remove

  #93 opened 3 years ago
  1

• [Feature Request] Place ReadMe.md in every arc folder

  #92 opened 3 years ago
  0

• [Feature Request] add standard .gitignore to arcs

  #91 opened 3 years ago
  0

• [BUG] Assay.xlsx IO does not completely follow specification

  #90 opened 2 years ago
  1