Pinned Repositories
12-labours-api
API for 12 Labours App
12-labours-app
Portal for the 12 labours
12-labours-design-system-component
Design system components for 12 labours
A1kmm-cellml-core-spec
CellML Core Specification Draft Development
A1kmm-cellml-dae-events-secondary
CellML Secondary specification for systems differential-algebraic equations
cellml
cm
examples
flattenCellML
Code to flatten CellML 1.1 models into 1.0 models
nickerso's Repositories
nickerso/12-labours-api
API for 12 Labours App
nickerso/12-labours-app
Portal for the 12 labours
nickerso/12-labours-design-system-component
Design system components for 12 labours
nickerso/abi-covid-19-ui
nickerso/Biosimulators_csimpy
Having a play with the Biosimulators SED-ML capabilities with libCellML and CellML 2.0 models in Python
nickerso/CellML-OpenCOR-PMR
Tutorial created by Peter Hunter, originally converted to Sphinx from a MS Word document.
nickerso/cellml1to2
Attempt at using XSLT to translate CellML 1.0 and 1.1 documents into the CellML 2.0 format.
nickerso/combine-org.github.io
nickerso/combine-specifications
nickerso/csimpy
Playing around with libsedml and libcellml in python
nickerso/embc23-credible-twins-workshop
Content for the EMBC 2023 workshop
nickerso/fair-dos-py-web
Testing out pyscript in the browser for a basic UI
nickerso/flatmap-maker
Make anatomical flatmaps from SVG diagrams, Powerpoint slides, and other sources.
nickerso/fma-vagus-branching
Having a play at exploring the vagus branching structure in FMA
nickerso/functional-connectivity
nickerso/journal-website
Source for journal.physiomeproject.org.
nickerso/libcellml
My fork of the prime repository for libCellML development.
nickerso/libcellml-python-utils
Andre playing with some Python scripts to do stuff with libCellML.
nickerso/libOmexMeta
nickerso/n98-opencor-jupyter
Demonstration of using OpenCOR+Python to run a jupyter notebook to simulation the Noble 1998 model in CellML+SED-ML.
nickerso/opencmiss-libxml2
LibXML2 version 2.7.6 mods made to suit the needs of LibZinc
nickerso/physiome-coko
Journal article submission system for the Physiome Journal.
nickerso/physiome-omex-utils
nickerso/physiomed-api
nickerso/pmr-collect-cellml
nickerso/pmr-utils
Collection of Andre's PMR utilities.
nickerso/pyomexmeta-binder-notebook
A demonstration of using pyomexmeta - the Python interface to libOmexMeta and the OMEX Metadata Specification.
nickerso/sample-from-pubmed
Selecting a cohort of publications from Pubmed which match a given query.
nickerso/tools-for-credible-digital-twins.github.io
Website for tools for credible digital twins
nickerso/W-PCT-E
Andre's fork: A modular and reusable model of epithelial transport in the proximal convoluted tubule.