Pinned Repositories
2vcf
www.openb.io/2vcf convert 23andme or Ancestry.com raw genotype calls into VCF format, with dbSNP annotations
affiliation_parser
Simple python parser for MEDLINE, Pubmed OA affiliation string
bash-lib
Library for bash utility methods and tools
bioinformatics_primer
Bioinformatics with Unix, bash, Make, Python, and parallel
checkVCF
Sanity check Variant Call Format (VCF) files.
datasciencecoursera
datasharing
The Leek group guide to data sharing
loopseq
Analysis for LoopSeq 16S manuscript
men
Male Egg Number model for Chung et al. 2019 Oikos
microbiome_helper
A repository of bioinformatic scripts, SOPs, and tutorials for analyzing microbiome data.
nico-chung's Repositories
nico-chung/affiliation_parser
Simple python parser for MEDLINE, Pubmed OA affiliation string
nico-chung/2vcf
www.openb.io/2vcf convert 23andme or Ancestry.com raw genotype calls into VCF format, with dbSNP annotations
nico-chung/bash-lib
Library for bash utility methods and tools
nico-chung/bioinformatics_primer
Bioinformatics with Unix, bash, Make, Python, and parallel
nico-chung/checkVCF
Sanity check Variant Call Format (VCF) files.
nico-chung/datasciencecoursera
nico-chung/datasharing
The Leek group guide to data sharing
nico-chung/loopseq
Analysis for LoopSeq 16S manuscript
nico-chung/men
Male Egg Number model for Chung et al. 2019 Oikos
nico-chung/microbiome_helper
A repository of bioinformatic scripts, SOPs, and tutorials for analyzing microbiome data.
nico-chung/navi
An interactive cheatsheet tool for the command-line and application launchers
nico-chung/ncbi-genome-download
Scripts to download genomes from the NCBI FTP servers
nico-chung/ProgrammingAssignment2
Repository for Programming Assignment 2 for R Programming on Coursera