Pinned Repositories
abcd_protocols
Documentation of the scan protocols used to collect the ABCD data
bids-b0-tools
Scripts, tools, and documents on creating, parsing, and working with BIDS-structured data sets.
coders_forum
A repo to document the tutorials/rants/discussions/musings at the coder's forum
dockerImage4DevMR
Docker build info and associated configuration files to build development container for MR scanners.
fmrif_tools
ml
nielson_abcd_2018
Code for Detecting and harmonizing scanner differences in the ABCD study - annual release 2.0
NIMH_repro_2017_03
A workshop on open and reproducible neuroscience held in March, 2017. These materials will cover 1) Using Python and Github to produce & share reproducible processing pipelines, 2) Structuring and reporting your data using community-recognized standards, 3) Accessing and contributing to shared repositories, 4) Using pre-print servers
NIMH_repro_2017_08
Repository for the NIMH Workshop on Open and Reproducible Neuroscience on Aug 1 & 2, 2017
SFIM_ME
NIMH Functional MRI Facility's Repositories
nih-fmrif/bids-b0-tools
Scripts, tools, and documents on creating, parsing, and working with BIDS-structured data sets.
nih-fmrif/abcd_protocols
Documentation of the scan protocols used to collect the ABCD data
nih-fmrif/coders_forum
A repo to document the tutorials/rants/discussions/musings at the coder's forum
nih-fmrif/dockerImage4DevMR
Docker build info and associated configuration files to build development container for MR scanners.
nih-fmrif/nielson_abcd_2018
Code for Detecting and harmonizing scanner differences in the ABCD study - annual release 2.0
nih-fmrif/ml
nih-fmrif/abcd_cca_replication
nih-fmrif/HCP_CCA_Analysis-1
The purpose of this study is to replicate the results of Smith et al. (https://www.fmrib.ox.ac.uk/datasets/HCP-CCA/) and extend this analysis to the larger HCP_1200 dataset
nih-fmrif/MLT_Body_Part_Segmentation
nih-fmrif/NIH_IRP_PubDB
An application to catalog and measure NIH IRP publications.
nih-fmrif/nimh_irp_clustering
nih-fmrif/project-tool
FMRIF Project Management command-line tool
nih-fmrif/scanner-change-timelines
nih-fmrif/scanner-state-monitor
nih-fmrif/git-training
nih-fmrif/machinelearning
public code releases from the NIMH Machine Learning Team
nih-fmrif/mlt-external
nih-fmrif/abcd-dicom2bids
For selectively downloading ABCD data QC'ed as good by the DAIC, converting it to BIDS standard input data, selecting the best pair of spin echo field maps, and correcting the sidecar JSON files to meet BIDS Validator spec.
nih-fmrif/codeconvergence
nih-fmrif/contarg
A python package implementing/wrapping methods for functional connectivity personalized targeting of rTMS therapy.
nih-fmrif/contarg_test_data
some default
nih-fmrif/mi_test
test ways to calculate mutual information between a discrete and continuous variable
nih-fmrif/mriqcwebapi
nih-fmrif/nih-fmrif.github.io
This github org account is used by the Center for Mutlimodal Neuroimaging and the Functional MRI Facility at the NIMH Intramural Research Program in Bethesda, Maryland
nih-fmrif/nimh_ds_env
NIHM OHBM Backend
nih-fmrif/nimh_fulltexts
Downloading NIMH fulltext papers from PMC with the goal of finding data statements
nih-fmrif/nimh_ohbm
NIMH OHBM front end
nih-fmrif/openneuro_search
nih-fmrif/pyretrodesign
nih-fmrif/sharestats