nilearn/nilearn

Issues

• [BUG] issue with masker.region_names_

  #4359 opened 2 months ago by mtorabi59
  2

• [ENH] Adjust the image output size of plotting.view_img()

  #4415 opened 25 days ago by alexsayal
  0

• [API] Contrast images are systematically 4D images, even if they're only one-dimensional

  #4413 opened a month ago by bthirion
  0

• Failures of some tests for load_confounds on mac OS 14

  #4404 opened a month ago by Remi-Gau
  11

• [BUG] RegionExtractor does not have a two-tailed behavior.

  #4409 opened a month ago by bthirion
  0

• Fitted NiftiSphereMasker should contain a representation of the mask ?

  #4345 opened 2 months ago by Remi-Gau
  8

• Doc not hosted or deployed by circle CI

  #4401 opened 2 months ago by Remi-Gau
  3

• TODO list related to dropping python 3.8

  #4399 opened 2 months ago by Remi-Gau
  0

• Is there an error in the design matrix from the second level two sample test example?

  #4400 opened 2 months ago by YCHuang0610
  10

• first_level_from_bids - More granularity in subject/session selection

  #4380 opened 2 months ago by andreaboscutti
  2

• Doc build is failing with Ubuntu 22.04

  #4398 opened 2 months ago by Remi-Gau
  1

• [BUG] Several functions under the `image` module do not carry over the header information to the output

  #4393 opened 2 months ago by man-shu
  0

• :rotating_light: NIGHTLY DEPENDENCIES TEST: failure on `refs/heads/main`

  #4396 opened 2 months ago by github-actions
  1

• [DOC] Add an example demonstrating header copying in `math_img`

  #4362 opened 2 months ago by man-shu
  0

• Nightly build test worklfow sometimes fails to open issue

  #4395 opened 2 months ago by Remi-Gau
  0

• Doc builds failing when using plotly

  #4379 opened 2 months ago by Remi-Gau
  0

• Set up "nightly build test" workflow

  #4358 opened 2 months ago by Remi-Gau
  1

• flake8 bugbear issues

  #4378 opened 2 months ago by Remi-Gau
  0

• Optimize masker and GLM reports in the doc build

  #4315 opened 2 months ago by Remi-Gau
  1

• make build release doc workflow more robust

  #4367 opened 2 months ago by Remi-Gau
  4

• doc build fails on data download

  #4389 opened 2 months ago by Remi-Gau
  2

• update `maint_tools/check_gha_workflow.py` to also monitor the doc build on main

  #4385 opened 2 months ago by Remi-Gau
  0

• Check that estimated attributes end with an underscore

  #4377 opened 2 months ago by Remi-Gau
  0

• [BUG] plotly in nilearn.surface.vol_to_surf opens two interactive windows

  #4376 opened 2 months ago by lilikapa
  4

• [DOC] Minor discrepancy in comparing means example

  #4363 opened 2 months ago by man-shu
  1

• release-docs.yml only triggers on release not on tags

  #4365 opened 2 months ago by Remi-Gau
  1

• clean up makefiles

  #4314 opened 2 months ago by Remi-Gau
  0

• report CSS and code refactor

  #4368 opened 2 months ago by Remi-Gau
  0

• Passing negative values as threshold for plotting

  #4340 opened 3 months ago by Remi-Gau
  9

• [ENH] Throw error when extra kwargs are given to `glm.first_level.first_level_from_bids`

  #4357 opened 2 months ago by michellewang
  1

• destrieux atlas returns wrong region_names_

  #4330 opened 3 months ago by Remi-Gau
  1

• failures to generate reports with several atlases

  #4331 opened 3 months ago by Remi-Gau
  2

• [BUG] Improving brain atlases and standardize them

  #4335 opened 3 months ago by mtorabi59
  3

• numpy 2 test workflow failures

  #4309 opened 2 months ago by Remi-Gau
  7

• [DOC] Update the release section of maintainence page

  #4355 opened 2 months ago by man-shu
  0

• [BUG] Matplotlib colormap not recognized in `reporter_visual_inspection_suite.py` due to British/Canadian spelling

  #4351 opened 2 months ago by michellewang
  3

• [DOC] Error in docstring for `nilearn.glm.first_level.first_level_from_bids`

  #4342 opened 2 months ago by michellewang
  1

• Failure of `test_surface.py::test_sampling_affine` using pre-release dependencies

  #4328 opened 2 months ago by Remi-Gau
  0

• [BUG] Discrepancy between decoding accuracies from nilearn's `Decoder` and pure sklearn implementation

  #4344 opened 2 months ago by man-shu
  3

• [ENH] Adding new checks and features to NiftiLabelsMasker reporting

  #4346 opened 2 months ago by mtorabi59
  3

• `first_level_from_bids` should throw warnings and not errors when failing to process one subject if some files are missing

  #4332 opened 3 months ago by Remi-Gau
  3

• Standardize "nilearn" atlases

  #4329 opened 3 months ago by Remi-Gau
  6

• Extend/improve support for pathlib.Path

  #4327 opened 3 months ago by Remi-Gau
  0

• [ENH] cluster threshold for surface GLM

  #4326 opened 3 months ago by mszinte
  1

• [BUG] `save_glm_to_bids` fails when the model is constructed with 'non-serializable' parameters

  #4324 opened 3 months ago by Remi-Gau
  0

• passing nifti to surface plotting functions fails

  #4312 opened 3 months ago by Remi-Gau
  7

• [DOC] Add Himanshu to authors

  #4321 opened 3 months ago by man-shu
  0

• [DOC] Unclear what are nilearn datasets on the contributing page

  #4319 opened 3 months ago by man-shu
  0

• [DOC] Update drop-in hour information on contributing page

  #4317 opened 3 months ago by man-shu
  2

• Tests failing on main with pytest 8.1.0

  #4305 opened 3 months ago by Remi-Gau
  4