Pinned Repositories
cellstates
Finding gene expression states in scRNA-seq data
E-Flow
vngFCM is a package designed to analyse fluocytometry data of small bacterial cells.
MiM_NikonTi
Config and scripts used to run a Nikon Eclipse Ti in the vanNimwegen lab.
MoMA-legacy
MoMA - the MotherMachine Analyzer
moma-model
U-Net models used with MoMA
moma-module
Module files for setting up MoMA using Lmod
moma-preprocessing-module
Module files for setting up moma preprocessing using Lmod
MoMA-tmp
RealTrace
Sanity
Filtering of Poison noise on a single-cell RNA-seq UMI count matrix
van Nimwegen Lab's Repositories
nimwegenLab/cellstates
Finding gene expression states in scRNA-seq data
nimwegenLab/MiM_NikonTi
Config and scripts used to run a Nikon Eclipse Ti in the vanNimwegen lab.
nimwegenLab/E-Flow
vngFCM is a package designed to analyse fluocytometry data of small bacterial cells.
nimwegenLab/moma
MoMA - the MotherMachine Analyzer
nimwegenLab/MoMA-legacy
MoMA - the MotherMachine Analyzer
nimwegenLab/moma-model
U-Net models used with MoMA
nimwegenLab/moma-module
Module files for setting up MoMA using Lmod
nimwegenLab/moma-preprocessing
Python image preprocessing for MoMA data.
nimwegenLab/moma-preprocessing-module
Module files for setting up moma preprocessing using Lmod
nimwegenLab/MoMA-tmp
nimwegenLab/MoMA_workshop_1
nimwegenLab/RealTrace
nimwegenLab/Sanity
Filtering of Poison noise on a single-cell RNA-seq UMI count matrix
nimwegenLab/vngMoM
Tools for analysing MoMA data in R
nimwegenLab/moma-batch-run
A script to script the processing of large sets of growthlanes using MoMA.
nimwegenLab/vngGrowthCurves