Pinned Repositories
alleleTools
Tools set to convert and transform TSV allele data
biobash
Common BASH routines for computational biology
CalliNGS-NF
GATK RNA-Seq Variant Calling in Nextflow
camelot-docker
This is the docker image for camelot library
cobratoolbox
The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:
covid19-CO
Analysis of covid 19 public data in Colombia South America
g2f
An R package to find the gaps in metabolic networks, and fill it from the stoichiometric reactions of a reference metabolic reconstruction using a weighting function. Also include the option to download all the set of gene-associated stoichiometric reactions for a specific organism from the KEGG database.
GSMs
Official Repository for Genome Scale Models created by our Team
gutsmash
gutSMASH - dockerfile
hla
IKMB pipeline to type HLA alleles from NGS data
nmendozam's Repositories
nmendozam/alleleTools
Tools set to convert and transform TSV allele data
nmendozam/biobash
Common BASH routines for computational biology
nmendozam/CalliNGS-NF
GATK RNA-Seq Variant Calling in Nextflow
nmendozam/camelot-docker
This is the docker image for camelot library
nmendozam/cobratoolbox
The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:
nmendozam/covid19-CO
Analysis of covid 19 public data in Colombia South America
nmendozam/g2f
An R package to find the gaps in metabolic networks, and fill it from the stoichiometric reactions of a reference metabolic reconstruction using a weighting function. Also include the option to download all the set of gene-associated stoichiometric reactions for a specific organism from the KEGG database.
nmendozam/GSMs
Official Repository for Genome Scale Models created by our Team
nmendozam/gutsmash
gutSMASH - dockerfile
nmendozam/hla
IKMB pipeline to type HLA alleles from NGS data
nmendozam/masterThesis
Computational modeling of a human astrocyte with multi-omic data
nmendozam/HLA-TAPAS
HLA-TAPAS pipeline for HLA association and fine-mapping studies bug-fix
nmendozam/HLAimputation
nmendozam/PyHLA
Python for HLA analysis: summary, association analysis, zygosity test and interaction test