noamBarkai

adam

ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.

DNABERT_S

DNABERT_S: Learning Species-Aware DNA Embedding with Genome Foundation Models

adam

ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark and Parquet. Apache 2 licensed.

DNABERT_S

DNABERT_S: Learning Species-Aware DNA Embedding with Genome Foundation Models

htsjdk

A Java API for high-throughput sequencing data (HTS) formats.

influxdb-java

Java client for InfluxDB

lz4-java

LZ4 compression for Java

sbt-cross

A better solution for building multiple Scala versions (cross compiling) in SBT

simuPOP

A general-purpose forward-time population genetics simulation environment.

utils

noamBarkai/adam

ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark and Parquet. Apache 2 licensed.

noamBarkai/DNABERT_S

DNABERT_S: Learning Species-Aware DNA Embedding with Genome Foundation Models

noamBarkai/htsjdk

A Java API for high-throughput sequencing data (HTS) formats.

noamBarkai/influxdb-java

Java client for InfluxDB

noamBarkai/lz4-java

LZ4 compression for Java

noamBarkai/sbt-cross

A better solution for building multiple Scala versions (cross compiling) in SBT

noamBarkai/simuPOP

A general-purpose forward-time population genetics simulation environment.

noamBarkai/utils