Pinned Repositories
AfterQC
Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data
bamsurgeon
tools for adding mutations to existing .bam files, used for testing mutation callers
focusCancer
focus the papers of cancer
focusNGS
focus the papers of NGS
hao
好东西传送门
linux
linux common commands
Probabilistic-Programming-and-Bayesian-Methods-for-Hackers
aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)
sand
Statistical Analysis of Network Data with R
statistics-cases-with-R-in-papers
statistics cases with R in papers
nordhuang's Repositories
nordhuang/focusCancer
focus the papers of cancer
nordhuang/focusNGS
focus the papers of NGS
nordhuang/statistics-cases-with-R-in-papers
statistics cases with R in papers
nordhuang/linux
linux common commands
nordhuang/Probabilistic-Programming-and-Bayesian-Methods-for-Hackers
aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)
nordhuang/AfterQC
Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data
nordhuang/bamsurgeon
tools for adding mutations to existing .bam files, used for testing mutation callers
nordhuang/bcbio-nextgen
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
nordhuang/bcftools
This is the official development repository for BCFtools. To compile, the develop branch of htslib is needed: git clone --branch=develop git://github.com/samtools/htslib.git htslib
nordhuang/cnvkit
Copy number variant detection from targeted DNA sequencing
nordhuang/ctdna_papers
papers collections of cancer detected from plasma
nordhuang/delly
DELLY: Structural variant discovery by integrated paired-end and split-read analysis
nordhuang/Duplex-Sequencing
nordhuang/echarts
A powerful, interactive charting and visualization library for browser
nordhuang/ENAR2016
Introduction to High Throughput Data Analysis Using R / Bioconductor
nordhuang/fastqPaper
I collect public fastq records in peer papers
nordhuang/focusFlask
nordhuang/focusMath
nordhuang/htslib
C library for high-throughput sequencing data formats
nordhuang/ISLR_labs
<<An Introduction to Statistical Learning with Applications in R>> lab codes
nordhuang/kubernetes
Production-Grade Container Scheduling and Management
nordhuang/latex-template-collection
A collection of different LaTeX templates (cv, invoices, timesheets, letters, etc.).
nordhuang/mutect-tool
nordhuang/MutScan
Detect important mutations by scanning FastQ files directly
nordhuang/nordhuang.github.io
nordhuang/papers_and_datas_and_R
nordhuang/pileup2base
Parse samtools pileup file to get how many bases and what kind of bases are called
nordhuang/samtools
Tools (written in C using htslib) for manipulating next-generation sequencing data
nordhuang/smlDatas
statistical machine learning Data sets for exercising
nordhuang/statistics_and_tips