/tapestri

analyze tapestri multiomics data

Primary LanguageRGNU General Public License v3.0GPL-3.0

Overview

northNomad/tapestri is forked from missionbio/tapestriR, an R package for DNA and DNA + Protein analysis of data generated by the Tapestri platform. For additional documentation and tutorials visit: https://missionbio.github.io/tapestriR/

Missionbio no longer maintains the tapestriR package.

northNomad/tapestri will serve the purpose of storing functions I write for a project.

Installation

Not compatible with R >= 4.0.0. Please use R 3.6.x.

Packages needed to run the vignettes

install.packages(c("devtools", "BiocManager", "tidyverse", "patchwork", "factoextra",  "NbClust", "uwot"))

Some users have reported defficultly in installing rhdf5. Users reported better luck using anaconda. Additional documentation for rhdf5: https://www.bioconductor.org/packages/release/bioc/html/rhdf5.html

BiocManager::install("rhdf5")

Install the tapestri package

devtools::install_github("northNomad/tapestri")