Snakemake based pipeline for processing most Gleeson Lab RNAseq data.
Input files are assumed to follow the pattern:
Raw_fastq_gz/{organism}/{sample}-sample_concat-*R1*.fastq.gz.
Split RSeQC suite into multiple rules.
npdeloss/Project_Pipeline_RNA-seq-Illumina_100bp_paired-end
Snakemake based pipeline for processing Gleeson Lab RNAseq data.
Python