Pinned Repositories
archetypes-framework
chicago_sentinel_surveillance
Tracking changes in SARS-CoV-2 transmission with a novel outpatient sentinel surveillance system in Chicago, USA.
covid-chicago
Simulating and analyzing Covid-19 transmission and hospital trends per region in Illinois.
FE-2023-examples
Example scripts for 2023 faculty enrichment program in applied malaria modeling at Northwestern
hbhi-dhs
DHS analysis scripts
hbhi-nigeria-publication-2021
Code and data for modeling analysis and shiny app associated with the manuscript titled 'Application of mathematical modeling to inform national malaria intervention planning in Nigeria'
Risk_factors_ITN_Guinea_DHS_2018
STL-routine_data-clean
Project repo for STL on routine case data from Burkina Faso
urban-malaria-dhs-publication-2022
Data and analysis scripts for examining factors associated with malaria test positivity in urban areas
within-host-calibration
EMOD within-host calibration with botorch
NU Malaria Modeling Team's Repositories
numalariamodeling/chicago_sentinel_surveillance
Tracking changes in SARS-CoV-2 transmission with a novel outpatient sentinel surveillance system in Chicago, USA.
numalariamodeling/FE-2023-examples
Example scripts for 2023 faculty enrichment program in applied malaria modeling at Northwestern
numalariamodeling/hbhi-nigeria-publication-2021
Code and data for modeling analysis and shiny app associated with the manuscript titled 'Application of mathematical modeling to inform national malaria intervention planning in Nigeria'
numalariamodeling/Burkina-trends-routine-data-publication-2021
Project directory for BFA trends paper
numalariamodeling/faculty-enrich-2022
Training materials for the faculty enrichment program 2022
numalariamodeling/faculty-enrich-2022-examples
Example code for the faculty enrichment program 2022
numalariamodeling/FE-2023-quarto-website
A quarto website for the 2023 Faculty Enrichment Program
numalariamodeling/hbhi-dhs
DHS analysis scripts
numalariamodeling/PMC_modeling_publication_2023
numalariamodeling/Risk_factors_ITN_Guinea_DHS_2018
numalariamodeling/snt_2022
numalariamodeling/STL-routine_data-clean
Project repo for STL on routine case data from Burkina Faso
numalariamodeling/urban-malaria-dhs-publication-2022
Data and analysis scripts for examining factors associated with malaria test positivity in urban areas
numalariamodeling/within-host-calibration
EMOD within-host calibration with botorch
numalariamodeling/covid-chicago-surveil
Code for simulating SARS-CoV-2 transmission in the sentinel surveillance paper (Toh et al. 2022)
numalariamodeling/covid-sentinel-surveil
numalariamodeling/environment_calibration
numalariamodeling/FE-2024-Ghana-examples
Example scripts for 2024 faculty enrichment program in applied malaria modeling at UHAS
numalariamodeling/FE_project_template
numalariamodeling/ICUtrigger_covid_chicago_paper_2022
Modeling robust COVID-19 intensive care unit occupancy thresholds for imposing mitigation to prevent exceeding capacities.
numalariamodeling/IL-covid-disparities-publication-2021
numalariamodeling/indie_emodpy
Setting up INDIE modeling workflow using emodpy
numalariamodeling/seasonality_setup
combining Ben's bf-seasonal fitting code with tobias' project-template
numalariamodeling/SNT-CODE-LIBRARY
numalariamodeling/snt-code-library-english-version
numalariamodeling/snt-code-library-french-version
numalariamodeling/snt-library
A quarto website for the 2023 Faculty Enrichment Program
numalariamodeling/snt-python-english-version
numalariamodeling/snt-python-french-version
numalariamodeling/snt_gin
Subnational tailoring of malaria interventions in Guinea