/VRData

Spawner and fraction wild data for the NWFSC Status Reviews.

Primary LanguageROtherNOASSERTION

README

See the WEBSITE for the data information. This Readme is for the package and data maintainers.

New data

  • Add new csv files to the data-raw folder.
  • See the wiki for instructions on data format.
  • Push to GitHub and the data will be automatically processed for the website via a GitHub Action.

The GitHub Action

The following will be run automatically.

Changing the man files and vignettes

The man files appear under the Reference tab and the vignettes appear under the Articles tab. The R and Rmd files for these are created by the function process_data_raw(). When you type

process_data_raw()

It processes the csv file in data-raw folder into a .rda object in data, a .R file, and a .Rmd vignette using the Roxygen header on the csv file. Change this file to change the look of the man or article files.

When the package is built, you can do ? to get the meta information.

Updating the webpage locally

Note, you can run process_data_raw() locally, but the GitHub repo is set up with a GitHub Action to automatically run process_data_raw() whenever a push to the data-raw folder happens.

Manual workflow

  • Build the package (click 'Install and Restart' in the build tab)
  • Add csv file to data-raw
  • Run process_data_raw()
  • Build the documentation, then build package
  • Run pkgdown::build_site()
library(VRData)
process_data_raw()
devtools::document(roclets = c('rd', 'collate', 'namespace'))
pkgdown::build_site()

Disclaimer

This repository is a scientific product and is not official communication of the National Oceanic and Atmospheric Administration, or the United States Department of Commerce. All NOAA GitHub project code is provided on an 'as is' basis and the user assumes responsibility for its use. Any claims against the Department of Commerce or Department of Commerce bureaus stemming from the use of this GitHub project will be governed by all applicable Federal law. Any reference to specific commercial products, processes, or services by service mark, trademark, manufacturer, or otherwise, does not constitute or imply their endorsement, recommendation or favoring by the Department of Commerce. The Department of Commerce seal and logo, or the seal and logo of a DOC bureau, shall not be used in any manner to imply endorsement of any commercial product or activity by DOC or the United States Government.