oHunewald

oHunewald's Stars

• JuliaLang/julia

  The Julia Programming Language

  Language:Julia45.5k93125.3k5.5k

• owid/covid-19-data

  Data on COVID-19 (coronavirus) cases, deaths, hospitalizations, tests • All countries • Updated daily by Our World in Data

  Language:Python5.7k1519363.6k

• alan-turing-institute/MLJ.jl

  A Julia machine learning framework

  Language:Julia1.7k45621156

• theislab/single-cell-tutorial

  Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"

  Language:Jupyter Notebook1.4k45101453

• plotly/Dash.jl

  Dash for Julia - A Julia interface to the Dash ecosystem for creating analytic web applications in Julia. No JavaScript required.

  Language:Julia4891712441

• kstreet13/slingshot

  Functions for identifying and characterizing continuous developmental trajectories in single-cell data.

  Language:R265824743

• saezlab/liana

  LIANA: a LIgand-receptor ANalysis frAmework

  Language:R175916131

• SimonDanisch/JSServe.jl

  Serving JS to the browser

  Language:JavaScript14565024

• dillondaudert/UMAP.jl

  Uniform Manifold Approximation and Projection (UMAP) implementation in Julia

  Language:Julia13082718

• HelenaLC/CATALYST

  Cytometry dATa anALYsis Tools

  Language:R661138831

• LCSB-BioCore/GigaSOM.jl

  Huge-scale, high-performance flow cytometry clustering in Julia

  Language:Julia314379

• exaexa/EmbedSOM

  Fast embedding ot multidimensional datasets, great for cytometry data

  Language:R25505

• biosurf/cyCombine

  Robust Integration of Single-Cell Cytometry Datasets

  Language:HTML234576

• molnsona/blossom

  Interactive dimensionality reduction for large datasets

  Language:C19242

• LCSB-BioCore/DistributedData.jl

  Simple distributed data manipulation and processing routines in Julia

  Language:Julia17570

• csjansen/SOMatic

  SOMatic is a tool for building Self-Organizing Maps and linking multiple maps.

  Language:C++142102

• bennyyclo/Cytofin

  Cytofin-an R package for CyTOF data integration

  Language:R10255

• gszep/FlowAtlas.jl

  an interactive explorer for flow cytometry data

  Language:JavaScript103320

• LCSB-BioCore/GigaScatter.jl

  Fast rasterization of huge amounts of tiny transparent points (in Julia)

  Language:Julia94100

• exaexa/panelbuilder

  Panel optimization and unmixing tool for multicolor and spectral cytometry

  Language:R5321

• gszep/FlowWorkspace.jl

  Load useful metadata from FlowJo workspace files such as gating strategies and sample groups

  Language:Julia42130

• exaexa/nougad

  non-linear unmixing by gradient descent

  Language:R3311

• exaexa/gigascatter-tiles

  zoomable gigascatter plots (WIP)

  Language:Julia130