Pinned Repositories
bio-attribute-ontology
source files for OBA (Ontology of Biological Attributes)
biological-spatial-ontology
An ontology for respresenting spatial concepts, anatomical axes, gradients, regions, planes, sides, and surfaces
cell-ontology
An ontology of cell types
human-phenotype-ontology
Ontology for the description of human clinical features
ncbitaxon
Build for NCBITaxon
obsolete-hdo
New repository for managing the source for the human disease ontology
provisional_cell_ontology
Draft cell type definitions from data - candidates for inclusion in CL
uberon
An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology
upheno
The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.
xenopus-phenotype-ontology
XPO represents anatomical, cellular, and gene function phenotypes occurring throughout the development of the African frogs Xenopus laevis and X. tropicalis.
obophenotype's Repositories
obophenotype/human-phenotype-ontology
Ontology for the description of human clinical features
obophenotype/cell-ontology
An ontology of cell types
obophenotype/uberon
An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology
obophenotype/upheno
The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.
obophenotype/bio-attribute-ontology
source files for OBA (Ontology of Biological Attributes)
obophenotype/ncbitaxon
Build for NCBITaxon
obophenotype/biological-spatial-ontology
An ontology for respresenting spatial concepts, anatomical axes, gradients, regions, planes, sides, and surfaces
obophenotype/provisional_cell_ontology
Draft cell type definitions from data - candidates for inclusion in CL
obophenotype/brain_data_standards_ontologies
A repository for co-ordinating work on ontologies for the Brain Data Standards Project
obophenotype/c-elegans-phenotype-ontology
Ontology for phenotypes pertaining to the nematode Caenorhabditis elegans and related nematodes used by the nematode genome database WormBase
obophenotype/xenopus-phenotype-ontology
XPO represents anatomical, cellular, and gene function phenotypes occurring throughout the development of the African frogs Xenopus laevis and X. tropicalis.
obophenotype/developmental-stage-ontologies
Source files for various species-specific stage ontologies
obophenotype/zebrafish-phenotype-ontology
A vocabulary for describing Zebrafish Phenotypes
obophenotype/c-elegans-gross-anatomy-ontology
C. elegans Gross Anatomy Ontology
obophenotype/dicty-phenotype-ontology
Dicty Phenotype Ontology
obophenotype/c-elegans-development-ontology
C. elegans Development Ontology
obophenotype/human-developmental-anatomy-ontology
Ontology of human developmental anatomy
obophenotype/mouse-anatomy-ontology
Ontologies for mouse anatomy and development
obophenotype/upheno-dev
Framework for the automated construction of uPheno 2.0
obophenotype/ascomycete-phenotype-ontology
obophenotype/cephalopod-ontology
An ontology of cephalopod anatomy and traits
obophenotype/hpo-translations
This repo will contain the Human Phenotype Ontology language profiles
obophenotype/chebi_obo_slim
A slimmed down version of CHEBI sufficient to cover 99% of the term needs across OBO ontologies
obophenotype/spider-ontology
An ontology for spider comparative biology including anatomical parts (e.g. leg, claw), behavior (e.g. courtship, combing), and products (e.g. silk, web, burrow).
obophenotype/sibo
Social Insect Behavior Ontology
obophenotype/pattern-review
obophenotype/pro_obo_slim
A repo to generate a pro slim for the OBO phenotype organisation
obophenotype/vccf-ontology
obophenotype/CCF_graphs
obophenotype/test-actions