ocbe-uio/DIscBIO

Issues

• Remove philentropy dependency

  #44 opened a year ago by wleoncio
  3

• Remove 1 dependency

  #43 opened a year ago by wleoncio
  0

• Replace call to boot() from Jaccard()

  #26 opened a year ago by wleoncio
  2

• Fix linting

  #38 opened a year ago by wleoncio
  0

• Unit tests failing

  #37 opened a year ago by wleoncio
  0

• Loading count matrix from 10x dataset in DIscBIO

  #41 opened a year ago by abhisheksinghnl
  6

• Prepare for upcoming Seurat v5 release

  #42 opened a year ago by Gesmira
  2

• DIscBIO doesn't install

  #21 opened 4 years ago by wleoncio
  1

• Binder failing to start

  #40 opened 2 years ago by wleoncio
  0

• Binder links on README point to dev

  #39 opened 2 years ago by wleoncio
  0

• Failing TravisCI builds

  #22 opened 3 years ago by wleoncio
  2

• The PPI function is writing to the user's disk

  #33 opened 4 years ago by wleoncio
  4

• Retry URLs on Networking and PPI functions

  #29 opened 4 years ago by wleoncio
  1

• Recreate unit tests

  #34 opened 4 years ago by wleoncio
  0

• Remove calls to KmeanOrder from notebook

  #25 opened 4 years ago by wleoncio
  0

• Standardize function names

  #27 opened 4 years ago by wleoncio
  1

• Networking outputs different network from hyperlink

  #23 opened 4 years ago by wleoncio
  2

• Aggregate K/MB selection into one function

  #32 opened 4 years ago by wleoncio
  1

• Adapt package to different types of organisms

  #28 opened 4 years ago by wleoncio
  3

• Unable to view code of Binder notebook

  #30 opened 4 years ago by wleoncio
  1

• Reorganize internal functions

  #31 opened 4 years ago by wleoncio
  0

• PPI error

  #24 opened 4 years ago by wleoncio
  1

• In a big dataset that has about 1400 cells the "plotSilhouette" function is not generating any plot.

  #19 opened 4 years ago by SystemsBiologist
  3

• ClustDiffGenes is generating opposite tables

  #20 opened 4 years ago by SystemsBiologist
  3

• Freezing on DEGanalysis

  #14 opened 4 years ago by wleoncio
  1

• New vignette hangs with reduced dataset

  #3 opened 5 years ago by wleoncio
  2

• Demo data is too large for examples

  #2 opened 5 years ago by wleoncio
  4

• Some functions implicitly require clustering

  #1 opened 5 years ago by wleoncio
  3