Pinned Repositories
DIMPLE
Coyote-Maestas Final Version
dms_analysis_stub
A stub for analysis and plotting of DMS experiments with R
dumpling
A Snakemake-based pipeline for analyzing DMS data, as used with Rosace
fraser-lab.github.io
Fraser Lab website
GPR68_DMS_QC
QC data for GPR68 DMS
GPR68_processing
Processing pipeline for GPR68 DMS data
MultiQC_dumpling
odcambc.github.io
A beautiful, simple, clean, and responsive Jekyll theme for academics
PESTO
PESTO is delicious.
rosace-docker
Containerized version of rosace deep mutational scanning package
odcambc's Repositories
odcambc/bio3d.ggplot
R package of utility functions for ggplotting bio3d matrix data
odcambc/biopython
Official git repository for Biopython (originally converted from CVS)
odcambc/DIMPLE_manuscript_figures
odcambc/ggmsa
:traffic_light: Visualizing publication-quality multiple sequence alignment using ggplot2
odcambc/LibraryAnalysis2
odcambc/phyx
phylogenetics tools for linux (and other mostly posix compliant) computers
odcambc/ProDy
A Python Package for Protein Dynamics Analysis
odcambc/PyRosetta.notebooks
Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design
odcambc/quantiprot
MIRROR of: Quantitative characteristics of protein sequences
odcambc/pioreactor
Hardware and software for accessible, extensible, and scalable bioreactors. Built on Raspberry Pi.
odcambc/rent_burden_app
Shiny app for visualizing rent burdens with census data
odcambc/theoj
The Open Journal
odcambc/topiary
Python framework for doing ancestral sequence reconstruction