odcambc

odcambc's Stars

• geerlingguy/internet-pi

  Raspberry Pi config for all things Internet.

  Language:Jinja4.3k69500448

• vincentarelbundock/modelsummary

  Beautiful and customizable model summaries in R.

  Language:HTML9101068275

• walkerke/census-with-r-book

  Source for Analyzing US Census Data: Methods, Maps, and Models in R by Kyle Walker, published with CRC Press

  Language:HTML814727

• HarveyBates/Phenobottle

  An open-source Raspberry-Pi based photobioreactor for cultivating and assessing physiology (photosynthesis & productivity) in microscopic algae.

  Language:C++621138

• pinellolab/AmpUMI

  Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)

  Language:Python40868

• andrewguy/biostructmap

  A Python package for mapping sequence aligned data onto protein structures

  Language:Python343212

• harmslab/topiary

  Python framework for doing ancestral sequence reconstruction

  Language:Python328117

• kWeissenow/EMBER3D

  Ultra-fast in-silico structure mutation

  Language:Python32436

• mikeblazanin/gcplyr

  gcplyr is an R package that facilitates wrangling and analysis of microbial growth curve data

  Language:R3032183

• CapraLab/lab-manuscript-template

  An academic manuscript template with writing tips in both LaTeX and MS Word format generated by the Capra Lab (2/2022)

  Language:TeX17400

• vishhvaan/eve-pi

  The EVolutionary biorEactor (EVE)

  Language:Python144914

• harmslab/gpmap

  A Python API for managing genotype-phenotype map data

  Language:Python111158

• konstin/knn-for-homology

  Repository for "Nearest neighbor search on embeddings rapidly identifies distant protein relations"

  Language:Python11210

• fmicompbio/mutscan

  Software to process, statistically analyse and visualise deep mutational scanning data

  Language:R106210

• ingolia-lab/turbidostat

  Language:C++75

• fmhall/Peristaltic-Pump

  Raspberry Pi communicates with 4 Arduinos over serial USB connection to regulate flow through 24 peristaltic pumps for use in a bioreactor.

  Language:C++6302

• damianosmel/dom2vec

  dom2vec: Protein domain embeddings

  Language:Python5100

• chasesagar/Project-Bioinformatics

  ChaseBio is a Bioinformatics tools application/ web-portal which enables the solution to some major molecular biology techniques for example Central dogma of molecular biology and many other created using custom python scripts and using Django framework and front end development tools. Which resulted in creative, simple, easy to visualize results that can be used for research and learning purposes.

  Language:JavaScript4101

• Daniyar1239/DIY-Bioreactor

  Language:C++4100

• neherlab/python_morbidostat

  Control software for a morbidostat reactor based on arduino and python

  Language:Python4403

• harmslab/gpvolve

  A Python API for computing evolutionary paths across genotype-phenotype maps and clustering of genotype-phenotype maps.

  Language:Python3986

• sleyn/ijump

  Software to search rearrangements in population sequencing data

  Language:Python32

• sleyn/morbidostat_construction

  Building Osterman Lab implementation of morbidostat

  Language:C++31

• sth144/bio-django

  A Python application on the Django framework. Provides a set of sequence manipulation and statistical utilities for bioinformatics.

  Language:Python31

• xf-omics/SHINE

  prediction of pathogenicity for inframe indels

  Language:C++3160

• PlethoraChutney/model-building-tools

  Little scripts for model building

  Language:Python20

• sleyn/Triclosan_EE_paper

  Experimental evolution of E. coli with exposure to triclosan

  Language:Python20

• surajvkothari/Bioreactor-Project

  The Bioreactor Project for Engineering Challenges at UCL with students from Electronic and Electrical Engineering (EEE)

  Language:Python2100

• sleyn/morbidostat_v2_construction

  Language:C++11

• songlab-cal/slc22a5

  Variant effect prediction for SLC22A5 transporter gene using Potts models

  Language:Jupyter Notebook120