Installs and configures OMERO ms image region
OMERO.server and OMERO.web are required.
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omero_ms_image_region_user: Microservice user, the defaults is 'omero-server'
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omero_ms_image_region_folder: Microservice installation folder
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omero_ms_image_region_port: Microservice port
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omero_ms_image_region_db_url: OMERO database URL
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omero_ms_image_region_db_port: OMERO database server port
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omero_ms_image_region_db_name: OMERO database name
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omero_ms_image_region_db_username: OMERO database user name
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omero_ms_image_region_db_pass: OMERO database user password
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omero_ms_image_region_log_level: Logging level, allowed values:
info
,debug
,error
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omero_data_dir: OMERO data folder
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omero_script_repo_root: OMERO scripts folder
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omero_ms_image_region_worker_pool_size: No of Microservice workers, the default is double the number of processors which the machine has
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session_id: OMERO Session id, if you do not know it, you may get it using this command:
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omero_ms_image_region_max_active_channels: Max number of channels to allow per request default is 10
/opt/omero/web/OMERO.web/bin/omero config get omero.web.session_cookie_name
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omero_ms_image_region_update_nginx: if false, it will not update the nginx config file
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omero_ms_image_region_download_URL: The download URl for the distibuted ms build (zip file)
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omero_ms_image_region_package_sha256: The sha256 for the distibuted ms build
The ms build should be compatible with the installed OMERO.server, i.e.:
- The bio-format version for the Microservice should match the Bio-Formats version of the OMERO.server
- Also, in case of using ngff data, the version of OMEZarrReader should be the same for both of the Microsevice and the OMERO.server.
- hosts: localhost
roles:
- role: ome.omero_ms_image_region
omero_ms_image_region_update_nginx: true