List invalid samples in README for testing
Opened this issue · 3 comments
will-moore commented
Maybe move these somewhere more permanent first?
- Invalid version (fails to load schema) https://deploy-preview-16--ome-ngff-validator.netlify.app/?source=https://minio-dev.openmicroscopy.org/idr/v0.3/invalid/9836842_version.zarr
- Various dataset/.zattrs errors (see #16) https://minio-dev.openmicroscopy.org/idr/v0.3/invalid/9836842_dimCount.zarr
- axes invalid (schema-validation): https://minio-dev.openmicroscopy.org/idr/v0.3/invalid/9836842_axes.zarr
- Image contains invalid labels: https://minio-dev.openmicroscopy.org/idr/v0.4/invalid/6001240.zarr
joshmoore commented
I'd suggest test-data:
mc ls uk1/idr/zarr/test-data
[2022-10-24 09:13:06 CEST] 0B 64x64-fake-v0.1/
[2022-10-24 09:13:06 CEST] 0B 64x64-fake-v0.2/
[2022-10-24 09:13:06 CEST] 0B bf2raw/
[2022-10-24 09:13:06 CEST] 0B idr0044/
[2022-10-24 09:13:06 CEST] 0B labels-0.1.3-dev4/
[2022-10-24 09:13:06 CEST] 0B test-v0.1.zarr/
[2022-10-24 09:13:06 CEST] 0B test-v0.2.zarr/
though we may want to add some more structure to it.
will-moore commented
Another sample I created for testing various NGFF viewers at ome/ngff#139: has downsample factor of 4: created by generating with bioformats2raw (v0.2), then removing alternating levels from the pyramid and updating the .zattrs to make a v0.4 sample:
https://minio-dev.openmicroscopy.org/idr/v0.4/idr0082/9846318.zarr/0
joshmoore commented
maybe an explicit uk1/idr/zarr/invalid-data would be safer.