openmedlab

Promoting large-scale pre-trained foundation models and adaptation in healthcare

Pinned Repositories

Awesome-Medical-Dataset
Collection of awesome medical dataset resources.
119 4 03
Endo-FM
[MICCAI'23] Foundation Model for Endoscopy Video Analysis via Large-scale Self-supervised Pre-train
184 1 24
MedFM
Official Repository of NeurIPS 2023 - MedFM Challenge
Language:Python254 2 714
MedLSAM
MedLSAM: Localize and Segment Anything Model for 3D Medical Images
Language:Python472 5 1918
MIS-FM
Language:Python223 2 65
PathoDuet
Language:Python166 3 94
PULSE
PULSE: Pretrained and Unified Language Service Engine
Language:Python443 4 1414
RETFound_MAE
RETFound - A foundation model for retinal image
Language:Jupyter Notebook62 1 04
USFM
Language:Python186 3 1010
XrayPULSE
Language:Python165 2 66

openmedlab's Repositories

openmedlab/MedLSAM
MedLSAM: Localize and Segment Anything Model for 3D Medical Images
Language:Python472 5 1918
openmedlab/PULSE
PULSE: Pretrained and Unified Language Service Engine
Language:Python443 4 1414
openmedlab/MedFM
Official Repository of NeurIPS 2023 - MedFM Challenge
Language:Python254 2 714
openmedlab/MIS-FM
Language:Python223 2 65
openmedlab/USFM
Language:Python186 3 1010
openmedlab/Endo-FM
[MICCAI'23] Foundation Model for Endoscopy Video Analysis via Large-scale Self-supervised Pre-train
184 1 24
openmedlab/PathoDuet
Language:Python166 3 94
openmedlab/XrayPULSE
Language:Python165 2 66
openmedlab/CITE
[MICCAI'23] Text-guided Foundation Model Adaptation for Pathological Image Classification
143 2 00
openmedlab/MIU-VL
This is a repository for the ICLR2023 accepted paper -- Medical Image Understanding with Pretrained Vision Language Models: A Comprehensive Study.
129 2 10
openmedlab/DeblurringMIM
Language:Python125 2 01
openmedlab/BROW
Language:Python123 1 20
openmedlab/Awesome-Medical-Dataset
Collection of awesome medical dataset resources.
119 4 03
openmedlab/STU-Net
The largest pre-trained medical image segmentation model (1.4B parameters) based on the largest public dataset (>100k annotations) to date.
110 2 03
openmedlab/PULSE-COVID-19
Language:Python107 2 00
openmedlab/RETFound_MAE
RETFound - A foundation model for retinal image
Language:Jupyter Notebook62 1 04
openmedlab/.github
61 1 0
openmedlab/SAM-Med2D
SAM-Med2D: Bridging the Gap between Natural Image Segmentation and Medical Image Segmentation
Language:Jupyter Notebook57 1 32
openmedlab/SAM-Med3D
SAM-Med3D: An Efficient 3D Model for Promptable Volumetric Medical Image Segmentation
Language:Python15 2 10
openmedlab/PULSE-EVAL
PULSE-EVAL
Language:Python14 1 00
openmedlab/dataset
Related medical image dataset from OpenMedLab and others.
12 2 02
openmedlab/A-Eval
A-Eval: A Benchmark for Cross-Dataset Evaluation of Abdominal Multi-Organ Segmentation
Language:Python4 1 0
openmedlab/Axon-Seg
The Foundation Model for Whole-brain Axon Segmentation and Circuitry Profiling.
2 1 0
openmedlab/Data-Centric-FM-Healthcare
2
openmedlab/OmniFM-DR
Language:Python2
openmedlab/Swin-UMamba
Language:Python2
openmedlab/Osteoarthritis-Benchmark
Benchmark for Assessing Large Language Models on Knowledge and Decision-Making Capacity in Osteoarthritis Treatment.
Language:Jupyter Notebook1
openmedlab/BrainSCK
Implementation code of BrainSCK.
openmedlab/ProSST
Code for ProSST: A Pre-trained Protein Sequence and Structure Transformer with Disentangled Attention.
Language:Python2 0
openmedlab/ProtSSN
Fusion of protein sequence and structural information, using denoising pre-training network for protein engineering (zero-shot).
Language:Python1 0