openworm/sibernetic

Issues

• User-defined geometries and muscle models

  #165 opened 5 years ago by wilhelmbraun
  18

• Segmentation fault when running Sibernetic built on WSL2

  #170 opened 4 years ago by clausagerskov
  11

• Exception: The provided 'key_property' entry does not appear to be a property

  #176 opened 4 years ago by woobin3069
  4

• Segmentation fault when pressing 1 or 2 to select demo simulation

  #169 opened 4 years ago by clausagerskov
  5

• Header files explicitly links a path to Python.h

  #171 opened 4 years ago by clausagerskov
  0

• Add simulation video recording utility

  #182 opened 3 years ago by mwatts15
  0

• Use python-config script for Python libraries in makefile

  #179 opened 3 years ago by mwatts15
  0

• Resolve compiler warnings

  #180 opened 3 years ago by mwatts15
  0

• Steps towards proprioceptive feedback

  #141 opened 7 years ago by pgleeson
  3

• Steps towards integration of touch sensation

  #144 opened 6 years ago by pgleeson
  6

• Asking for simulation

  #168 opened 4 years ago by cory020330
  13

• No such file or directory muscles_activity_buffer.txt

  #175 opened 4 years ago by waayst
  1

• Ubuntu 20.04: free(): double free detected in tchache 2 when replaying simulation

  #173 opened 4 years ago by clausagerskov
  1

• Sibernetic crashes with no error message on windows 64 bit

  #143 opened 4 years ago by clausagerskov
  11

• How to expand the liquid particles?

  #147 opened 6 years ago by slarson
  2

• Double text in README

  #153 opened 5 years ago by pgleeson
  4

• Add more molecular in sibernetic?

  #163 opened 5 years ago by hjabo
  0

• Rerun (-l_from) simulation inside openworm container

  #154 opened 6 years ago by lungd
  4

• Pressure buffer file issue

  #160 opened 6 years ago by lungd
  6

• Pressure file format issue

  #146 opened 6 years ago by pgleeson
  2

• Performance changes in latest development branch

  #145 opened 6 years ago by pgleeson
  8

• Document the way to access the body position on each step?

  #148 opened 6 years ago by slarson
  1

• Steps towards Multi-GPU support / significant performance improvement

  #135 opened 7 years ago by slarson
  6

• ImportError: No module named main_sim

  #139 opened 7 years ago by ZZcat
  1

• Update sibernetic site

  #103 opened 7 years ago by skhayrulin
  0

• Make code review

  #114 opened 7 years ago by skhayrulin
  0

• Muscle activation should be set only by the Python class

  #129 opened 7 years ago by pgleeson
  6

• pySibernetic: A Python wrapper for Sibernetic

  #122 opened 7 years ago by ranr01
  1

• Save simulation in hdf5 files

  #134 opened 7 years ago by skhayrulin
  1

• Create OpenCL-enabled Docker Node AMI & successfully run Sibernetic in a container on top of it

  #105 opened 7 years ago by slarson
  0

• CL_OUT_OF_RESOURCES error on Nvidia GTX 1060 copying position buffer from device

  #136 opened 7 years ago by jhurlbut
  5

• Worm body modelling and mechanics - parameters, values etc.

  #127 opened 7 years ago by a-palyanov
  12

• Create simplified scene for Sibernetic that runs faster

  #118 opened 7 years ago by slarson
  9

• Implement three parallel methods for injecting activity into muscle cells

  #112 opened 7 years ago by slarson
  1

• Tests not working on latest commit

  #124 opened 7 years ago by slarson
  2

• Enhance configuration files with physical parameters specific to full/half resolution worm

  #128 opened 7 years ago by pgleeson
  3

• Error: narrowing conversion while running 'make all' command

  #130 opened 7 years ago by chandan-shashidhar
  1

• Instructions for building on linux are incorrect

  #131 opened 7 years ago by dhd5076
  0

• Worm_motion_log contains only zeros in full scale resolution worm

  #125 opened 7 years ago by slarson
  2

• Liquid particles streaming out of standard cube

  #126 opened 7 years ago by slarson
  1

• Commandline option to output line chart related to the movement of the worm

  #119 opened 8 years ago by slarson
  13

• Write Doc how to run Sibernetic with neuron

  #107 opened 8 years ago by skhayrulin
  0

• Flag that enables the producing of a time series speed chart from Sibernetic

  #117 opened 8 years ago by slarson
  0

• Run with c302 - "Generating images for neuronal activity" error

  #116 opened 8 years ago by lungd
  15

• Bug with .openworm.yml

  #109 opened 8 years ago by cheelee
  1

• Difficulty running with both -nrn and -f worm

  #113 opened 8 years ago by slarson
  3

• Calibrate sibernetic worm movements to signals from neural data

  #108 opened 8 years ago by nmsutton
  1

• Generate faster renders

  #101 opened 8 years ago by nmsutton
  12

• Work with Sibernetic-NEURON sync

  #106 opened 8 years ago by skhayrulin
  0

• More config file variable docs

  #102 opened 8 years ago by nmsutton
  3