/Plasmodium_Interactome

Interactive visualization webapp for protein interactions in Plasmodium.

Primary LanguageJupyter NotebookMIT LicenseMIT

Plasmodium Interactome

An interactive visualization and graphical user interface for the protein interaction data in the studies of LaCount et al. (2005), DOI 10.1038/nature04104, and Hillier et al. (2019), DOI 10.1016/j.celrep.2019.07.019.

Nodes (genes) colored according to putative protein complex cluster (colors repeat themselves, black is no cluster predicted).

Blue lines show interactions with selected gene, black are interactions among the gene's neighbors.

Made by Pablo Cárdenas at the Niles Lab, MIT BE using sigma.js.

GitHub src here.