patrick-douglas
Currently working in neuroscience and transcriptomics, with focus in migratory birds and fish behavior #RNA-Seq #Transcriptomics #Behavior #Neuroscience
Laboratório de Biologia Molecular e NeuroecologiaMontreal, Canada
Pinned Repositories
auto-beast
AutoHPC
ccminer
CUDA Open Source miner project, for most nvidia cards
Cereal
A simple & fast serialization library written for C++
MTD
MTD: a unique pipeline for host and meta-transcriptome joint and integrative analyses of RNA-seq data
Seqs-Extractor
The official Seqs-Extractor Repository
StereoInvestigator-Neurolucida-VBA-tools
Stereology and Three-dimensional reconstruction Excel tools Neurolucida
WPTweaker
Registry tweaker for Windows Phone 8.1 and Windows 10 Mobile
VIRTUS
A bioinformatics pipeline for viral transcriptome detection and quantification considering splicing.
VIRTUS2
A bioinformatics pipeline for viral transcriptome detection and quantification considering splicing.
patrick-douglas's Repositories
patrick-douglas/Seqs-Extractor
The official Seqs-Extractor Repository
patrick-douglas/WPTweaker
Registry tweaker for Windows Phone 8.1 and Windows 10 Mobile
patrick-douglas/auto-beast
patrick-douglas/AutoHPC
patrick-douglas/ccminer
CUDA Open Source miner project, for most nvidia cards
patrick-douglas/Cereal
A simple & fast serialization library written for C++
patrick-douglas/cobaltplusplus
Cobalt for Notepad++.
patrick-douglas/Corset-tools
Companion scripts for annotation of Corset generated transcript clusters.
patrick-douglas/generator-of-random-replicates
Simple script to generate a random SSR populations from a provided database.
patrick-douglas/HpcGridRunner
source code for HpcGridRunner
patrick-douglas/HpcGridRunner.github.io
web documentation for HpcGridRunner
patrick-douglas/MEGASAT
High-throughput analysis of targeted microsatellite sequences.
patrick-douglas/Miranda_et_al_2021
Shorebird’s longer migratory distances are associated with larger ADCYAP1 microsatellites and greater morphological complexity of hippocampal astrocytes
patrick-douglas/MTD
MTD: a unique pipeline for host and meta-transcriptome joint and integrative analyses of RNA-seq data
patrick-douglas/StereoInvestigator-Neurolucida-VBA-tools
Stereology and Three-dimensional reconstruction Excel tools Neurolucida
patrick-douglas/mkpw
Generates strong passwords for linux logins
patrick-douglas/SamGate
Create input files for MegaSat
patrick-douglas/trimming_paper
files for Trimming paper
patrick-douglas/trinityrnaseq
Trinity RNA-Seq de novo transcriptome assembly
patrick-douglas/Trinotate.github.io
web documentation for Trinotate
patrick-douglas/ubuntu-slurm
Steps to create a small slurm cluster with GPU enabled nodes
patrick-douglas/VIRTUS2
A bioinformatics pipeline for viral transcriptome detection and quantification considering splicing.