paulgfahey

paulgfahey's Stars

• DeepLabCut/DeepLabCut

  Official implementation of DeepLabCut: Markerless pose estimation of user-defined features with deep learning for all animals incl. humans

  Language:Python4.8k1272k1.7k

• google-research/kubric

  A data generation pipeline for creating semi-realistic synthetic multi-object videos with rich annotations such as instance segmentation masks, depth maps, and optical flow.

  Language:Jupyter Notebook2.4k40189234

• holoviz/colorcet

  A set of useful perceptually uniform colormaps for plotting scientific data

  Language:Python696184054

• MouseLand/rastermap

  a visualization method for neural data

  Language:Python199122748

• MouseLand/facemap

  Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes singular value decomposition (SVD) of behavioral videos.

  Language:Python1611010262

• circstat/pycircstat

  Toolbox for circular statistics with Python

  Language:Python160142542

• AllenInstitute/scrattch.hicat

  Hierarchical, iterative clustering for analysis of transcriptomics data in R

  Language:HTML107153231

• oderby/cmap2d

  A small library for generating and sampling 2D RGB colormaps.

  Language:Jupyter Notebook3203