Pinned Repositories
galaxy_codex
Galaxy Communities Dock aka Galaxy Codex: catalog of Galaxy resources (tools, training, workflows)
bachelor-thesis
beer_microbiome
Repo for my master thesis on beer microbiome
BiG-SCAPE
Similarity networks of biosynthetic gene clusters
BiG-SCAPE_Galaxy
DeepMicro
Deep representation learning for disease prediction based on microbiome data
docker-phyloseq
Dockerized deployment of the shiny-phyloseq app
galaxy-hub
Galaxy Community Hub
tagespaul_2.0
Raspberry Pi based color Tagespaul 2.0
usegalaxy-eu-tools
List of tools included in https://usegalaxy.eu
paulzierep's Repositories
paulzierep/cluster2vec
paulzierep/cmsearch_tblout_deoverlap
Script that removes lower scoring overlaps from cmsearch v1.1x --tblout files.
paulzierep/datatable-rendering
paulzierep/DeepMicro
Deep representation learning for disease prediction based on microbiome data
paulzierep/ena-cog-uk-wfs
Collection of scripts for automated SARS-CoV-2 genome surveillance.
paulzierep/flp
find long path (flp) algorithm
paulzierep/Foodborne-Project-Data-Analysis
paulzierep/GCDraw
Gene Cluster drawing and manipulation tool
paulzierep/kraken2-db-builder
scripts to download NCBI genomes and create costum kraken2 db
paulzierep/MAPseq
highthroughput rRNA sequence classification and OTU mapping for metagenomic samples
paulzierep/mgnify-api
paulzierep/microgalaxy-survey
paulzierep/multi_modality_prediction
paulzierep/NP_epitope_predictor
Pre-Fitted Non-Peptidic Epitope Predictor
paulzierep/planemo
Command-line utilities to assist in developing Galaxy and Common Workflow Language artifacts - including tools, workflows, and training materials.
paulzierep/RSEc-content
A metadata commons to store research software metadata
paulzierep/SeMPI_web_docu
Documentation for SeMPI 2
paulzierep/snail_house
paulzierep/SSR-viz
Protein subfamily specific residues (SSR) detection and visualization tool
paulzierep/test_repo_multi_wrapper
paulzierep/test_repo_multi_wrapper_2
paulzierep/WavesDash
A web application for visualization of wastewater sequencing results
paulzierep/website
UseGalaxy.EU website (compiled version https://github.com/usegalaxy-eu/usegalaxy-eu.github.io)