pd321

Bioinformatics research

Monash UniversityMelbourne

Pinned Repositories

analysis_template
A template for generic analysis
00
atacseq
Snakemake based pipeline for atacseq dataanalysis
Language:Python0 2 90
build-your-own-x
Master programming by recreating your favorite technologies from scratch.
00
chipseq
A snakemake based workflow for ChIPSeq data analysis
Language:Python0 3 180
create-reference-indices
A snakemake workflow to create reference indices and other supplementary files for analysis
Language:Python0 2 10
cs-video-courses
List of Computer Science courses with video lectures.
0 0 00
dnaseq
Snakemake based workflow for analysis of dnaseq data for calling germline/somatic mutations
Language:Python0 1 22
HemTools
HemTools: a collection of NGS pipelines and bioinformatic analyses
Language:Python00
intron-retention-scripts
Scripts for intron retention analysis from RNA-Seq data
Language:Python0 1 11
rnaseq
Snakemake based pipeline for analysis of rnaseq data
Language:Python0 2 30

pd321's Repositories

pd321/analysis_template
A template for generic analysis
00
pd321/atacseq
Snakemake based pipeline for atacseq dataanalysis
Language:Python0 2 90
pd321/build-your-own-x
Master programming by recreating your favorite technologies from scratch.
00
pd321/chipseq
A snakemake based workflow for ChIPSeq data analysis
Language:Python0 3 180
pd321/create-reference-indices
A snakemake workflow to create reference indices and other supplementary files for analysis
Language:Python0 2 10
pd321/cs-video-courses
List of Computer Science courses with video lectures.
0 0 00
pd321/dnaseq
Snakemake based workflow for analysis of dnaseq data for calling germline/somatic mutations
Language:Python0 1 22
pd321/HemTools
HemTools: a collection of NGS pipelines and bioinformatic analyses
Language:Python00
pd321/intron-retention-scripts
Scripts for intron retention analysis from RNA-Seq data
Language:Python0 1 11
pd321/m5c
Repository for m5c data analysis
Language:Python0 2 00
pd321/rnaseq
Snakemake based pipeline for analysis of rnaseq data
Language:Python0 2 30
pd321/Deep-learning-books
Books for machine learning, deep learning, math, NLP, CV, RL, etc
pd321/m6A
A workflow for m6A data analysis
Language:Python
pd321/public-files
A set of public files needed downstream in other places
pd321/PythonPlantsVsZombies
a simple PlantsVsZombies game
pd321/scripts
Handy scripts to do miscellaneous tasks
Language:Python
pd321/snakemake-wrappers
This is the development home of the Snakemake wrapper repository, see
Language:CAP CDS
pd321/sra-explorer
Web application to explore the Sequence Read Archive.
Language:HTML
pd321/TUI-ConsoleLauncher
Linux CLI Launcher for Android

pd321

Pinned Repositories

analysis_template

atacseq

build-your-own-x

chipseq

create-reference-indices

cs-video-courses

dnaseq

HemTools

intron-retention-scripts

rnaseq

pd321's Repositories

pd321/analysis_template

pd321/atacseq

pd321/build-your-own-x

pd321/chipseq

pd321/create-reference-indices

pd321/cs-video-courses

pd321/dnaseq

pd321/HemTools

pd321/intron-retention-scripts

pd321/m5c

pd321/rnaseq

pd321/Deep-learning-books

pd321/m6A

pd321/public-files

pd321/PythonPlantsVsZombies

pd321/scripts

pd321/snakemake-wrappers

pd321/sra-explorer

pd321/TUI-ConsoleLauncher