pesho-ivanov
Comp.Bio postdoc @ Penn State; PhD from ETH Zurich: Optimal sequence alignment using A*
Penn StateState College
Pinned Repositories
astarix
AStarix: Fast and Optimal Sequence-to-Graph Aligner
alignment-tutorial
Sequence alignment tutorial on mdBook
celldive
configs
config files
cphb
Competitive Programmer's Handbook
crispr
CRISPR simulation
glass-cutting
A genetic algorithm for 2D bin-packing (with rotations and guillotine cuts)
minSH
A minimal Python re-implementation of the A* with seed heuristic for exact global alignmnet (edit distance) in near-linear time
pesho-ivanov.github.io
personal sandbox tiddlywiki
thesis-manim
My thesis presentation on manim
pesho-ivanov's Repositories
pesho-ivanov/minSH
A minimal Python re-implementation of the A* with seed heuristic for exact global alignmnet (edit distance) in near-linear time
pesho-ivanov/glass-cutting
A genetic algorithm for 2D bin-packing (with rotations and guillotine cuts)
pesho-ivanov/crispr
CRISPR simulation
pesho-ivanov/celldive
pesho-ivanov/pesho-ivanov.github.io
personal sandbox tiddlywiki
pesho-ivanov/alignment-tutorial
Sequence alignment tutorial on mdBook
pesho-ivanov/thesis-manim
My thesis presentation on manim
pesho-ivanov/configs
config files
pesho-ivanov/cphb
Competitive Programmer's Handbook
pesho-ivanov/cv
Curriculum vitae
pesho-ivanov/health
My health & medical data
pesho-ivanov/manim-voiceover
Manim plugin for all things voiceover
pesho-ivanov/gtl
Greg's Template Library of useful classes.
pesho-ivanov/martinus.github.io
Build a beautiful and simple website in literally minutes. Demo at http://deanattali.com/beautiful-jekyll
pesho-ivanov/microcin
Microcin bacterial system simulation and verification
pesho-ivanov/miniasm
Ultrafast de novo assembly for long noisy reads (though having no consensus step)
pesho-ivanov/minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences
pesho-ivanov/ngmlr
NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on reads that span structural variations
pesho-ivanov/ordered-hash
STL-style ordered hash table: search tree + hash table
pesho-ivanov/pesho.info
Personal website + blog
pesho-ivanov/petar-ivanov
personal site + blog
pesho-ivanov/phylo-mas
Tool for intersecting two phylogenetic trees in Newick notation
pesho-ivanov/presentations
pesho-ivanov/recomb-seq.github.io
pesho-ivanov/shkola-ab
Материали по информатика за Школа А&Б
pesho-ivanov/students-abroad
Students abroad website
pesho-ivanov/students-abroad-source
Source code for the site students-abroad