Pinned Repositories
bigwig-loader
A fast dataloader for bigwig files made for machine learning
moa-profiler
pfabnet-viscosity
pharma-hands-on-exercises
Rmd training files for getting started with R. Introduces R concepts for data manipulation, visualization and other topics using PhUSE synthetic data.
scikit-digital-health
Python package for the processing and analysis of Inertial Measurement Unit Data
shiny-framework
Shiny Framework for reproducible content - Create table in Shiny, then run a production step (on HPC GRID) and compare table objects for 100% match
torsional-strain
TorsionNet
A Deep Neural Network to predict small molecule torsion energy profiles with the accuracy of QM
transform-molecules
zippeR
Tools for Working with ZIP Codes, ZCTAs, and 3-digit ZCTAs (R package)
Pfizer Open Source's Repositories
pfizer-opensource/scikit-digital-health
Python package for the processing and analysis of Inertial Measurement Unit Data
pfizer-opensource/TorsionNet
A Deep Neural Network to predict small molecule torsion energy profiles with the accuracy of QM
pfizer-opensource/bigwig-loader
A fast dataloader for bigwig files made for machine learning
pfizer-opensource/torsional-strain
pfizer-opensource/transform-molecules
pfizer-opensource/pfabnet-viscosity
pfizer-opensource/pharma-hands-on-exercises
Rmd training files for getting started with R. Introduces R concepts for data manipulation, visualization and other topics using PhUSE synthetic data.
pfizer-opensource/zippeR
Tools for Working with ZIP Codes, ZCTAs, and 3-digit ZCTAs (R package)
pfizer-opensource/shiny-framework
Shiny Framework for reproducible content - Create table in Shiny, then run a production step (on HPC GRID) and compare table objects for 100% match
pfizer-opensource/moa-profiler
pfizer-opensource/CoSpred
Mass Spectrometry Spectrum Prediction Workflow
pfizer-opensource/mouse-echo-neural-net
pfizer-opensource/pseudo
pfizer-opensource/pfaster
pneumococcal FASTA serotype calling
pfizer-opensource/CTMC-NAFLD-fibrosis
pfizer-opensource/graphs-renderer
A javascript library that provides rendering capabilities for CFD, scatterplot and Histogram graphs. It uses d3js for graph rendering.
pfizer-opensource/mitochondria-metabolism
This is a mechanistic model of myocardial mitochondrial metabolism including oxidative phosphorylation, $\beta$-oxidation, TCA cycle, metaboilte transport and electrophysiology. The model is used to evaluate how substrate selection influences myocardial energetics at rest and during exercise under healthy and heart failure conditions.
pfizer-opensource/MLAST
Mouse Lung Automated Segmentation Tool
pfizer-opensource/TRR-ACoP2022-Public
Public release version of ACoP2022
pfizer-opensource/carver
Clinical Analysis Reporting and Visualization Ensemble (in R)
pfizer-opensource/mixed-mode-mpnn
MPNNs for Modeling Retention Times from Mixed Mode Chromatography / ESI Negative MS Detection
pfizer-opensource/Open-Hotgenes
pfizer-opensource/remaster-the-tidyverse-pfizer
pfizer-opensource/Dataset-JSON-1.1-Interface
pfizer-opensource/DeepMLAST
Deep learning project for automated semantic segmentation of spontaneous lung tumors in murine microCT
pfizer-opensource/deprivateR
Tools for calculating and visualizing measures of deprivation for social determinants of health research in the United States (R package)
pfizer-opensource/e3moldiffusion
pfizer-opensource/integrated-qsp-vpop-onco-efficacy-CPT-PSP
Code for the manuscript "An integrated quantitative systems pharmacology virtual population approach for calibration with oncology efficacy endpoints."
pfizer-opensource/LISTT
Lyme In Silico Typing Tool for Borrelia burgdorferi s.l.
pfizer-opensource/Peripheral-blood-cellular-dynamics-of-Rheumatoid-arthritis