Pinned Repositories
advRkoans
advRkoans is an interactive tutorial for learning advanced R programming by making tests pass
cookiecutter-r-analysis-template
Cookiecutter template for R data analysis with jupyter notebooks
Mtb_genomic_lists
Curated lists of features for Mtb genomic analysis
weather_station
Micropython-based weather station
pgcudahy's Repositories
pgcudahy/cookiecutter-r-analysis-template
Cookiecutter template for R data analysis with jupyter notebooks
pgcudahy/weather_station
Micropython-based weather station
pgcudahy/advRkoans
advRkoans is an interactive tutorial for learning advanced R programming by making tests pass
pgcudahy/Mtb_genomic_lists
Curated lists of features for Mtb genomic analysis
pgcudahy/auto-selfcontrol
Small utility to schedule start and stop times of SelfControl
pgcudahy/Bio-DB-NCBIHelper
BioPerl modules for accessing data from NCBI
pgcudahy/docker_builds
pgcudahy/epm_301_aa
Mock outbreak investigation
pgcudahy/ggdag
:arrow_lower_left: :arrow_lower_right: An R package for working with causal directed acyclic graphs (DAGs)
pgcudahy/kodi_qr_launcher
pgcudahy/KrakenTools
KrakenTools provides individual scripts to analyze Kraken/Kraken2/Bracken/KrakenUniq output files
pgcudahy/librespot-docker
pgcudahy/linuxbrew-core
🍻🐧 Core formulae for the Homebrew package manager on Linux
pgcudahy/LMPTHW
Learn more python 3 the hard way exercises
pgcudahy/LSHTM_EPM_202
LSHTM EPM_202 workbook exercises in R
pgcudahy/megadetectorv5_docker
pgcudahy/micropython-waveshare-epaper
MicroPython drivers for Waveshare e-paper modules
pgcudahy/mlrpt-runner
Schedule mlrpt captures of meteor-2 data on a raspberry pi using systemd
pgcudahy/nitter_redirect_ng
A browser extension that redirects Twitter links to Nitter instead.
pgcudahy/python_koans
Python Koans - Learn Python through TDD
pgcudahy/r-conda
R and RStudio via conda packages in repo2docker
pgcudahy/RD-Analyzer
pgcudahy/SICP-exercises
Wizard book exercises
pgcudahy/sos
SoS workflow system for daily data analysis
pgcudahy/sos-r
SoS extension for R
pgcudahy/vcfProcess
Variant Call Format to CSV and FASTA with filtering of SNPs and INDELs and identification of mixed infection