Variant Call Format to CSV and FASTA with filtering of SNPs and INDELs and identification of mixed infection
regions2exclude.csv is an example file with H37Rv reference coordinates for repeat regions and PE/PPE and common AMR determining genes.
Variant Call Format to CSV and FASTA with filtering of SNPs and INDELs and identification of mixed infection
RMIT
Variant Call Format to CSV and FASTA with filtering of SNPs and INDELs and identification of mixed infection
regions2exclude.csv is an example file with H37Rv reference coordinates for repeat regions and PE/PPE and common AMR determining genes.