phraber

aakbar

Amino-Acid k-mer Tool

alphabetsoup

fix alphabet and gene length problems in protein FASTA files

diceware

python implementation of diceware (using os.urandom)

lassie

Select sites and sequences from a serially sampled alignment

mdl

meta-lass

This provides an interactive shiny interface to the LASSIE package.

mpgram

This provides an interactive shiny interface to the pixelgram package.

nis

Compute Tier-Scaled Serum Neutralization Indices for Sera or Antibodies

pixelgram

An R package that implements paired tree (phylogram) and pixel plots to view polymorphisms among aligned sequences.

plot2up

Generates a PDF paired tree & pixel plot for each fasta file in cwd.

phraber/lassie

Select sites and sequences from a serially sampled alignment

phraber/aakbar

Amino-Acid k-mer Tool

phraber/alphabetsoup

fix alphabet and gene length problems in protein FASTA files

phraber/diceware

python implementation of diceware (using os.urandom)

phraber/mdl

phraber/meta-lass

This provides an interactive shiny interface to the LASSIE package.

phraber/mpgram

This provides an interactive shiny interface to the pixelgram package.

phraber/nis

Compute Tier-Scaled Serum Neutralization Indices for Sera or Antibodies

phraber/pixelgram

An R package that implements paired tree (phylogram) and pixel plots to view polymorphisms among aligned sequences.

phraber/plot2up

Generates a PDF paired tree & pixel plot for each fasta file in cwd.