Pinned Repositories
trajpy
Trajpy - empowering feature engineering for trajectory analysis across domains.
actomyosin
angio
Developing a 3D phase-field modelling for tumor angiogenesis
phy_utils
Personal library of codes developed for data analysis.
PhyBio
Making phase-field modelling simpler.
PhyBioJS
Introducing multi-phase-field models for biological systems in the browser with JavaScript and Plot.ly!
ProstProject
Modelling prostate cancer growth
SPiCCAto
Software developed to study the influence of the extracellular matrix in cell migration.
phydev's Repositories
phydev/PhyBio
Making phase-field modelling simpler.
phydev/SPiCCAto
Software developed to study the influence of the extracellular matrix in cell migration.
phydev/ProstProject
Modelling prostate cancer growth
phydev/angio
Developing a 3D phase-field modelling for tumor angiogenesis
phydev/tcga-supertreat
Download gene expression data from TCGA for a subset of patients selected in the SuPerTreat project.
phydev/actomyosin
phydev/phy_utils
Personal library of codes developed for data analysis.
phydev/PhyBioJS
Introducing multi-phase-field models for biological systems in the browser with JavaScript and Plot.ly!
phydev/cells
Simulating a multicellular system with a phase-field model
phydev/cells3d
phydev/CELLTAS
CELLular migraTion mAchine Simulator
phydev/data
phydev/fftw
Laplace Solver with Fast Fourier Transform in the West
phydev/ggbiplot
A biplot based on ggplot2
phydev/gists
fragment of codes to be executed on the cloud
phydev/hmodel
An implementation for the Model H applied to multicellular systems
phydev/jupyter_notebooks
This is my personal collection of jupyter notebooks. I am sharing it in hope of being useful for someone else.
phydev/laplace3d
3D laplace equation solver implemented with a 3D virtual topology in MPI
phydev/MetSim
phydev/mice
Multiple imputation with chained equation implemented from scratch. This is a low performance implementation meant for pedagogical purposes only.
phydev/phydev
Phydev's GitHub profile.
phydev/phydev.github.io
phydev.github.io
phydev/PyBlog
Serverless blog system powered by python and GitHub Actions.
phydev/PyBot
Python Console in twitter.
phydev/RCourse
R with Tidyverse material for advanced experimental design course
phydev/scripts
Collection of scripts for research related tasks
phydev/supertreat_api
SuPerTreat prediction models API
phydev/systems-oncology
Finite Element method and finite differences implementations for Fokker-Planck equation
phydev/trajpy
Trajectory classifier for nanoparticles, cells & whatelse.