plantinformatics/pretzel

Navigation for VCF Genotype Search tab

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Part of #383

Observable outcomes / Acceptance criteria :

Activation of the VCF Genotype Search tab arranges the window display to suit the activity, as listed.

Measured with :
Screen-shot showing result of navigation.


navigation :

  • [2-6H/0H] toggle bottom / right panel position to right
    No additional action required because nitial default is changed in #374 e62a1f3
  • [2-6H/5H] select Genotype Table in bottom/right panel
    786d3c2 ensure that Genotype Table is displayed when genotype-search is used.
  • [2H/1H] manageGenotype (set by constructor)
    Done in bac6680 add genotype-search
  • [1-2D/6H/0H] block : set viewed, set domain, set brushed domain, via existing block & axis1d functions
    9fb2d7e Collate featuresDomain of each block from result and view the blocks and brush the domain of the result features

Test

This test confirms that automatic navigation to the 'Genotype Table' occurs when the user users the 'Genotype Search' panel / dialog, by entering input parameters : dataset Id, Sample names, SNP names.

Test Case

In the 'Genotype Search' panel, select the VCF Dataset name; the genotype table is displayed

The same result is achieved by entering the Sample names and / or SNP Names.

Results

Screenshot

Peek.2024-06-17.14-03.webm