/overlapper

A shiny app to explore overlaps between lists

Primary LanguageR

overlapper

A shiny app to explore overlaps between lists. Includes:

  • Venn diagrams
  • UpSet plots
  • Dotplots of pairwise overlap (with enrichment, size and significance of the overlaps)
  • An interactive heatmap of pairwise overlaps reporting in addition the actual items of the intersections
  • Permutation-based significance tests of the overlap between more than 2 sets.

Install with

BiocManager::install("plger/overlapper")

and then launch with

library(overlapper)
overlapper()