Add all data classes to protein feature summary view
ValWood opened this issue · 8 comments
Suggestions from @Antonialock
Some of these classes are not used often, but only show the classes that are present anyway
By "data class" do you mean tracks? Some are very big and wouldn't work well in a summary:
You are right.
I think there is no need to show chains, helices, strands, and turns on the front page. They are an algortihm rather than specific data points.
Deletions don't really work as a summary track.
I think we could show active sites, I can't remember the other types and I can't find the original e-mail about this for some reason?
Which ones do we currently show/not show?
These are the tracks configured for the genes pages. The choices are a bit random sorry. It's mostly tracks that aren't usually very tall.
- AA substitution positions
- Modifications
- Glycosylation sites
- Pfam domains
- TM domains
- Disordered regions
- Low complexity
- Coiled coils
- Signal peptide
- Transit peptide
What are the ones that aren't configured?
These are the track that we don't show in the summary:
- AA substitution alleles
- Active sites
- Beta strands
- Binding sites
- Chains
- Disulfide bonds
- Helices
- Lipidation sites
- Partial deletions
- Propeptides
- Turns
I think we should display:
Propeptides
Lipidations sites (as modifications)
Disulfide bonds
Binding sites
Active sites
we already display
we already display "aa substitution positions"
I think we should display:
I've added those to the configuration for the summary, except for:
Lipidations sites (as modifications)
That's covered by this issue: