pratikunterwegs
Research software engineer in epidemic modelling and pandemic preparedness @mrc-ide.
Imperial CollegeLondon
pratikunterwegs's Stars
marceloprates/prettymaps
A small set of Python functions to draw pretty maps from OpenStreetMap data. Based on osmnx, matplotlib and shapely libraries.
sshuair/awesome-gis
😎Awesome GIS is a collection of geospatial related sources, including cartographic tools, geoanalysis tools, developer tools, data, conference & communities, news, massive open online course, some amazing map sites, and more.
sacridini/Awesome-Geospatial
Long list of geospatial tools and resources
pydata/xarray
N-D labeled arrays and datasets in Python
opengeos/segment-geospatial
A Python package for segmenting geospatial data with the Segment Anything Model (SAM)
Auburn/FastNoiseLite
Fast Portable Noise Library - C# C++ C Java HLSL GLSL JavaScript Rust Go
fatiando/verde
Processing and gridding spatial data, machine-learning style
domluna/JuliaFormatter.jl
An opinionated code formatter for Julia. Plot twist - the opinion is your own.
GeostatsGuy/GeostatsPy
GeostatsPy Python package for spatial data analytics and geostatistics. Started as a reimplementation of GSLIB, Geostatistical Library (Deutsch and Journel, 1992) from Fortran to Python, Geostatistics in a Python package. Now with many additional methods. I hope this resources is helpful, Prof. Michael Pyrcz
EpiModel/EpiModel
Mathematical Modeling of Infectious Disease Dynamics
cesaraustralia/DynamicGrids.jl
Grid-based simulations in Julia
aazuspan/wxee
A Python interface between Earth Engine and xarray for processing time series data
rocker-org/geospatial
Docker-based Geospatial toolkit for R, built on versioned Rocker images
WorldHealthOrganization/godata
Codebase and Community of Practice for Go.Data (https://goarn.who.int/virtual-spaces/godataproject), an outbreak investigation tool developed by WHO in collaboration with Global Outbreak Alert and Response Network Partners.
zepinglee/citeproc-lua
A Lua implementation of the Citation Style Language (CSL) for use with LaTeX
ChrKoenig/Big_Data_Ecology
Materials for the Workshop "Big Data Ecology"
jedalong/wildlifeDI
R package for analysing interactions in wildlife telemetry data.
jeffhowarth/eeprimer
Primer for Google Earth Engine
epiverse-trace/cfr
R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series
epiverse-trace/finalsize
R package to calculate the final size of an SIR epidemic in populations with heterogeneity in social contacts and disease susceptibility
epicentre-msf/epishiny
Tools for interactive visualisation of epidemiological data
ecoisilva/AKDE_minireview
Review and guide to autocorrelated home range estimation
joshwlambert/DAISIEprep
Extracts phylogenetic island community data from phylogenetic trees
ecoisilva/SORTEE_H03
Maths-against-Malaria/COVID19_Spatial_Model
This repository contains the implementation of the model described in the paper "Predicting the impact of COVID-19 vaccination campaigns - a flexible age-dependent spatially-stratified predictive model, accounting for multiple viral variants and vaccines".
sdwfrost/model-runner-zoo
Examples of models plus connectors for the model runner
appliedepi/epiJuliahandbook_eng
The repository for the English version of the Epidemiologist Julia Handbook
joshwlambert/roop
epiverse-trace/epiversedashboard
Epiverse-TRACE activity dashboard
nicholasdavies/covidm_shiny2
COVID-19 transmission model Shiny app, version 2