privefl/bigstatsr

Issues

• Save transposed version of matrix

  #192 opened 25 days ago by raygozag
  1

• Question about memory

  #189 opened 3 months ago by wbooker
  2

• Improve plots for SVD

  #191 opened a month ago by privefl
  0

• FBM Object Mathematical Operation

  #190 opened 2 months ago by Minta821
  2

• Is there more information about the details of the Z-test in bigstatsr?

  #186 opened 4 months ago by garyzhubc
  1

• control MAF filtering?

  #183 opened 4 months ago by annilk
  3

• How to cbind/rbind two big matrices that have the same dimension

  #176 opened 4 months ago by minhnd212
  13

• How to use big_apply properly

  #175 opened 4 months ago by minhnd212
  4

• Can I use univLogReg to test additive effects?

  #188 opened 4 months ago by garyzhubc
  1

• Is it recommended to standardize X when using big_univLogReg?

  #187 opened 5 months ago by garyzhubc
  1

• big_prodMat throws takes a really long time and finally throws an out-of-memory error

  #184 opened 7 months ago by shachideshpande
  6

• Scaling predictor variables both in training and test datasets

  #180 opened 7 months ago by annilk
  5

• Extracting scores from each inner validation

  #182 opened 8 months ago by leocob
  2

• Error in `big_cor()` when using `block.size = 1`

  #181 opened 8 months ago by privefl
  0

• Implementation of `dimnames` for FBM matrices

  #179 opened 8 months ago by dramanica
  2

• Issues with locking of the backing file

  #178 opened 8 months ago by dramanica
  6

• Fixed and random effect

  #165 opened 8 months ago by dongleihu
  6

• OpenMP flag is not passed

  #162 opened 8 months ago by barracuda156
  19

• Binary traits problem

  #171 opened 8 months ago by wangnanwei
  1

• The result is NA

  #172 opened 8 months ago by Knight1995
  12

• Is there a function similar to rbind(), cbind() but for FBM objects

  #174 opened 9 months ago by minhnd212
  2

• How to delete a .bk file during a session

  #173 opened 9 months ago by minhnd212
  2

• Reading existing .bk files

  #141 opened 3 years ago by yavyx
  12

• Specify the location of the backing file resulting from `big_cor`

  #170 opened a year ago by fmorgante
  8

• How to ensure indices of response are aligned with the genotype matrix in big_univLogReg?

  #169 opened a year ago by garyzhubc
  6

• How to get p-value out of gwas<-big_univLinReg(...) object?

  #168 opened a year ago by garyzhubc
  10

• Variable selection

  #167 opened a year ago by dongleihu
  6

• Perform `colSums(X^2)` on FBM object

  #166 opened a year ago by fmorgante
  2

• Predicting using only 1 specific lambda value

  #164 opened a year ago by leocob
  2

• Estimation of model performance

  #163 opened 2 years ago by arnonl
  1

• Support for character type data?

  #161 opened 2 years ago by jarbet
  1

• adding columns to FBM

  #160 opened 2 years ago by chrisraynerr
  4

• Repeated measures (mixed model) GWAS

  #159 opened 2 years ago by chrisraynerr
  5

• Any matrix multiplication function support sparse matrix?

  #158 opened 2 years ago by JianqiaoWang
  3

• Greater use of generics

  #156 opened 2 years ago by multimeric
  6

• Read data using ‘bigsnpr’ package and run Linear mixed effect model using other packages

  #155 opened 2 years ago by NadiAlipour
  3

• Could I use `big_spLogReg()` for multi-class L1-regularized logistic regression?

  #153 opened 2 years ago by antonioggsousa
  11

• segfault with big_prodMat

  #154 opened 2 years ago by opain
  2

• Low CPU %?

  #152 opened 3 years ago by biona001
  3

• Bug in big_tcrossprodSelf: backingfile option missing

  #149 opened 3 years ago by mkelcb
  5

• big_tcrossprodSelf: requested size is too large; suggest to enable ARMA_64BIT_WORD

  #150 opened 3 years ago by mkelcb
  5

• How to efficiently normalized imputation probabilities of the genotype matrix to between zero and one?

  #148 opened 3 years ago by garyzhubc
  1

• How does dfmax work?

  #151 opened 3 years ago by biona001
  2

• Question about predictor to instance ratio when using big_spLinReg or big_spLogReg

  #147 opened 3 years ago by mfknie
  3

• Downloading bigstatsr not working on mac

  #146 opened 3 years ago by burtoand
  1

• Add convenience function to make own parameter 'fun.scaling'

  #145 opened 3 years ago by privefl
  1

• Help with interpreting the bigstatsr results

  #140 opened 3 years ago by annilk
  7

• Error in docs for big_spLogReg {bigstatsr}

  #143 opened 3 years ago by Deleetdk
  1

• Task 1 failed: "'from' must be a finite number"

  #142 opened 3 years ago by malvarez-avalo
  2

• big_prodMat Error: You can't have missing values in 'X'.

  #139 opened 3 years ago by jianvhuang
  2