quantumjot

Turing Fellow, Associate Professor and using AI for Science

UCL & The Alan Turing InstituteLondon

Pinned Repositories

arboretum
Track and lineage visualization with btrack and Napari :evergreen_tree:
Language:Python43 5 5611
btrack
Bayesian multi-object tracking
Language:Python310 12 23550
CellTracking
Cell tracking using TensorFlow and BayesianTracker
23 3 07
cellx
DL/ML library for CellX project
Language:Python5 3 285
Fenotype
Graphs in rust :crab:
Language:Rust0 1 00
folly
Experiments in computer graphics with ARM assembly
Language:Assembly0 2 00
PyFolding
Python framework for multi-parameter optimization and evaluation of protein folding models
Language:Python16 4 54
sequitr
Microscopy image processing with TensorFlow
Language:Python5 4 11
TrackGraph.jl
Language:Julia10

quantumjot's Repositories

quantumjot/btrack
Bayesian multi-object tracking
Language:Python310 12 23550
quantumjot/CellTracking
Cell tracking using TensorFlow and BayesianTracker
23 3 07
quantumjot/PyFolding
Python framework for multi-parameter optimization and evaluation of protein folding models
Language:Python16 4 54
quantumjot/cellx
DL/ML library for CellX project
Language:Python5 3 285
quantumjot/sequitr
Microscopy image processing with TensorFlow
Language:Python5 4 11
quantumjot/BIOC0016-MachineLearning
BIOC0016 Machine Learning practical
Language:Jupyter Notebook1 2 12
quantumjot/napari-fireworks
Language:Jupyter Notebook1 2 01
quantumjot/NPC-localisation-tools
MATLAB tools to extract, rotate and align structures from super-resolution imaging data
Language:MATLAB1 3 00
quantumjot/TrackGraph.jl
Language:Julia10
quantumjot/Fenotype
Graphs in rust :crab:
Language:Rust0 1 00
quantumjot/folly
Experiments in computer graphics with ARM assembly
Language:Assembly0 2 00
quantumjot/affinity-vae
quantumjot/BIOC0003-IntroductionToPython
Language:Jupyter Notebook2 03
quantumjot/cellx-predict
CellX predict
Language:Python1 0
quantumjot/cellx-predict-scivision
Language:Jupyter Notebook1 0
quantumjot/cryoEM-object-detection
A notebook demonstrating object detection in cryoEM micrographs
quantumjot/dcgan
Deep Convolutional Generative Adversarial Networks based on TensorFlow / TensorLayer
Language:Python2 0
quantumjot/impy-tools
Additional tools for use with ImPy
Language:Python
quantumjot/napari
napari: a fast, interactive, multi-dimensional image viewer for python
Language:Python1 0
quantumjot/OctopusLite
Automated timelapse acquisition
Language:Python2 1
quantumjot/pixelflow
quantumjot/profet
Protein structure Fetcher
Language:Python1 0
quantumjot/PyFolding-Notebooks
Notebooks and example data for PyFolding
Language:Jupyter Notebook2 0
quantumjot/quantumjot.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
Language:JavaScript
quantumjot/scivision
A framework for scientific image analysis
Language:Python1 0
quantumjot/scivision-test-plugin
Language:Python3
quantumjot/starfile
RELION STAR files as pandas DataFrames
Language:Python0 0
quantumjot/timelapse_alpha
Arduino based timelapse acquisition code
Language:C++2 0
quantumjot/tutorials
tutorials for the napari image viewer
Language:HTML1 0
quantumjot/vne
von Neumman's Elephant
Language:Python2 33