Output bam file with relocated anchored STR mates

Question

Output bam file with relocated anchored STR mates

hdashnow opened this issue 5 years ago · 1 comments

Optionally output a bam file where anchored mates containing mostly STR have been relocated to their approximate position.

Answer 1 · 2021-03-24T20:18:51.000Z

This is partially implemented with the strling pull_region command to get pairs in a region. Could potentially do something more genome-wide, but no current use case.