raamana
Neuroscientist trying to bridge the gap between clinic & computer science. Interests: Machine learning, Neuroimaging, Brain disorders, Informatics, Open science
University of PittsburghPittsburgh, PA
Pinned Repositories
confounds
Conquering confounds and covariates: methods, library and guidance
graynet
Subject-wise networks from structural MRI, both vertex- and voxel-wise features (thickness, GM density, curvature, gyrification)
hiwenet
Histogram-weighted Networks for Connectivity & Advanced Analysis in Neuroscience
kernelmethods
Foundational library for Kernel methods in pattern analysis and machine learning
missingdata
missing data handing: visualize and impute
mrivis
medical image visualization library and development toolkit
neuropredict
Easy and comprehensive assessment of predictive power, with support for neuroimaging features
niatlas
Atlas methods and classes for neuroimaging
pyradigm
Research data management in biomedical and machine learning applications
visualqc
VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
raamana's Repositories
raamana/neuropredict
Easy and comprehensive assessment of predictive power, with support for neuroimaging features
raamana/visualqc
VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
raamana/kernelmethods
Foundational library for Kernel methods in pattern analysis and machine learning
raamana/confounds
Conquering confounds and covariates: methods, library and guidance
raamana/graynet
Subject-wise networks from structural MRI, both vertex- and voxel-wise features (thickness, GM density, curvature, gyrification)
raamana/pyradigm
Research data management in biomedical and machine learning applications
raamana/mrivis
medical image visualization library and development toolkit
raamana/hiwenet
Histogram-weighted Networks for Connectivity & Advanced Analysis in Neuroscience
raamana/niatlas
Atlas methods and classes for neuroimaging
raamana/ANTsPy
Advanced Normalization Tools in Python
raamana/Ax
Adaptive Experimentation Platform
raamana/causallib
A Python package for modular causal inference analysis and model evaluations
raamana/dcmstack
DICOM to Nifti conversion with meta data preservation
raamana/DecodingTrust
A Comprehensive Assessment of Trustworthiness in GPT Models
raamana/dicom_parser
Facilitates DICOM data access.
raamana/fsleyes
This is a mirror. Feel free to use the issue tracker. PRs welcome.
raamana/giskard
🐢 The testing framework for ML models, from tabular to LLMs
raamana/guardrails
Adding guardrails to large language models.
raamana/hatch
Modern, extensible Python project management
raamana/heudiconv
A flexible DICOM converter for organizing brain imaging data into structured directory layouts
raamana/hv_protocol
Data curation scripts of a comprehensive clinical, MRI, and MEG collection characterizing healthy research volunteers collected at the National Institute of Mental Health (NIMH) Intramural Research Program (IRP).
raamana/lm-evaluation-harness
A framework for few-shot evaluation of language models.
raamana/matplotlib
matplotlib: plotting with Python
raamana/mrQA
mrQA: tools for quality assurance in medical imaging datasets, including protocol compliance
raamana/ohbm-dic.github.io
OHBM DIC website
raamana/protocol
generic framework to develop protocols, with an initial focus medical imaging acquisition
raamana/pybids
Python package to access BIDS datasets
raamana/raamana
raamana/the-algorithm
Source code for Twitter's Recommendation Algorithm
raamana/the-algorithm-ml
Source code for Twitter's Recommendation Algorithm