Nanopore sequencing with GraphMap for comprehensive pathogen detection in potato field soil
Manuscript is currently in review
This is the code and analysis for this article.
Journal Article is: Nanopore sequencing with GraphMap for comprehensive pathogen detection in potato field soil
Lauren B. Braley, Jeremy B. Jewell, Jodi L. Humann, Dorrie Main, Guadalupe A. Mora-Romero, Natalia Moroz, James W. Woodhall, Jose Figueroa, Richard Allen White III and Kiwamu Tanaka
Analysis
This repo holds scripts to process data and build graphs. Outputs, results, and figures are included as well in this repo. Doc has detailed methods and steps to recreate the mapping analysis.
Data
The informatics point-of-contact for this project is Dr. Richard Allen White III.
If you have any questions or feedback, please feel free to get in touch by email.
Dr. Richard Allen White III
Jose Figueroa.
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open an issue.