rays22

rays22's Stars

• alacritty/alacritty-theme

  Collection of Alacritty color schemes

  Language:Shell1.5k127

• alacritty/alacritty

  A cross-platform, OpenGL terminal emulator.

  Language:Rust54.8k3k

• EnvironmentOntology/environmental-exposure-ontology

  Modular environmental exposures ontology

  Language:Makefile3218

• ebi-chebi/ChEBI

  Chemical Entities of Biological Interest (ChEBI) is a freely available dictionary of molecular entities focused on ‘small’ chemical compounds.

  3910

• obophenotype/chebi_obo_slim

  A slimmed down version of CHEBI sufficient to cover 99% of the term needs across OBO ontologies

  Language:Ruby21

• monarch-initiative/curate-gpt

  LLM-driven curation assist tool (pre-alpha)

  Language:Jupyter Notebook4911

• OBOFoundry/purl.obolibrary.org

  A system for managing OBO PURLs

  Language:Python75128

• monarch-initiative/ontogpt

  LLM-based ontological extraction tools, including SPIRES

  Language:Jupyter Notebook55769

• INCATools/ontology-access-kit

  Ontology Access Kit: A python library and command line application for working with ontologies

  Language:Jupyter Notebook11024

• biopragmatics/curies

  🐸 Idiomatic conversion between URIs and compact URIs (CURIEs) in Python

  Language:Python216

• nowthis/sankeymatic

  Make Beautiful Flow Diagrams

  Language:JavaScript862123

• obo-behavior/behavior-ontology

  Neuro Behaviour Ontology: an ontology for human and animal behaviour processes and behaviour phenotypes

  Language:Makefile2515

• OBOFoundry/OBOFoundry.github.io

  Metadata and website for the Open Bio Ontologies Foundry Ontology Registry

  Language:Python163201

• rays22/obook

  OBO Organized Knowledge: Training materials for becoming an OBO engineer

  1

• rays22/OLS-Config

  Configuration for OLS

  1

• protegeproject/protege

  Protege Desktop

  Language:Java975231

• INCATools/semantic-sql

  SQL and SQLite builds of OWL ontologies

  Language:Python333

• OntoZoo/ontobee

  Ontobee is a linked data server for ontologies. See: http://www.ontobee.org.

  Language:PHP275

• obophenotype/biological-spatial-ontology

  An ontology for respresenting spatial concepts, anatomical axes, gradients, regions, planes, sides, and surfaces

  Language:Makefile125

• FlyBase/flybase-controlled-vocabulary

  The home of the FlyBase miscellaneous ontologies - incorporating the Drosophila Phenotype Ontology (see also FlyBase/drosophila-phenotype-ontology)

  Language:Shell95

• obophenotype/zebrafish-phenotype-ontology

  A vocabulary for describing Zebrafish Phenotypes

  Language:Python93

• obophenotype/xenopus-phenotype-ontology

  XPO represents anatomical, cellular, and gene function phenotypes occurring throughout the development of the African frogs Xenopus laevis and X. tropicalis.

  Language:Makefile83

• obophenotype/c-elegans-phenotype-ontology

  Ontology for phenotypes pertaining to the nematode Caenorhabditis elegans and related nematodes used by the nematode genome database WormBase

  Language:Makefile104

• INCATools/obographviz

  Customizable translation of OBO graphs to dot for visualization using graphviz and other tools

  Language:JavaScript236

• mapping-commons/sssom-py

  Python toolkit for SSSOM mapping format

  Language:Python4810

• FlyBase/drosophila-anatomy-developmental-ontology

  The home of the Drosophila anatomy ontology

  Language:Jupyter Notebook186

• INCATools/dosdp-tools

  Utility for working with DOSDP design patterns and OWL ontologies

  Language:Scala235

• bio-ontology-research-group/unit-ontology

  An ontology of units of measurements

  Language:Makefile1912

• obophenotype/ncbitaxon

  Build for NCBITaxon

  Language:Python257

• INCATools/ubergraph

  Integrated OBO ontology store

  Language:Makefile423