R Epidemics Consortium

Consortium for epidemics analysis and outbreak response using R

Pinned Repositories

aweek
Convert dates to arbitrary week definitions :calendar:
Language:R17 2 174
covid19hub
Community-driven COVID-19 analytics in R
59 17 112
deployer
Self-contained R environment on a thumb drive
Language:R10 6 253
epicontacts
Handling, Visualisation and Analysis of Epidemiological Contacts
Language:R15 10 8219
incidence
☣:chart_with_upwards_trend::chart_with_downwards_trend:☣ Compute and visualise incidence
Language:R58 12 8113
learn
RECON learn: a free, open platform for training material on epidemics analysis
Language:HTML35 8 3830
linelist
An R package to import, clean, and store case data
Language:R26 5 605
outbreaker2
Disease outbreak reconstruction from epidemiological and genetic data
Language:R29 9 4620
reconhub.github.io
Official website for RECON - The R Epidemics CONsortium
Language:R30 10 668
trendbreaker
Analysing epidemic trends using AutoML approaches.
Language:R18 5 387

R Epidemics Consortium's Repositories

reconhub/covid19hub
Community-driven COVID-19 analytics in R
59 17 112
reconhub/incidence
☣:chart_with_upwards_trend::chart_with_downwards_trend:☣ Compute and visualise incidence
Language:R58 12 8113
reconhub/learn
RECON learn: a free, open platform for training material on epidemics analysis
Language:HTML35 8 3830
reconhub/reconhub.github.io
Official website for RECON - The R Epidemics CONsortium
Language:R30 10 668
reconhub/outbreaker2
Disease outbreak reconstruction from epidemiological and genetic data
Language:R29 9 4620
reconhub/linelist
An R package to import, clean, and store case data
Language:R26 5 605
reconhub/epiflows
☣:airplane: Risk assessment of travel-related disease spread
Language:R18 8 2111
reconhub/trendbreaker
Analysing epidemic trends using AutoML approaches.
Language:R18 5 387
reconhub/aweek
Convert dates to arbitrary week definitions :calendar:
Language:R17 2 174
reconhub/epicontacts
Handling, Visualisation and Analysis of Epidemiological Contacts
Language:R15 10 8219
reconhub/projections
Projections of future incidence
Language:R14 4 228
reconhub/deployer
Self-contained R environment on a thumb drive
Language:R10 6 253
reconhub/earlyR
Estimation of infectiousness in the early stage of an outbreak, with short-term predictions.
Language:R9 7 153
reconhub/epitrix
Small Helpers and Tricks for Epidemics Analysis
Language:R9 4 155
reconhub/matchmaker
Dictionary-based cleaning for categorical variables
Language:R9 4 52
reconhub/nomad
:package::point_right::school_satchel: Pack up R to take away
Language:R8 5 152
reconhub/report_factories_templates
Templates of report factories
Language:R8 8 158
reconhub/guides
Recon's guidelines for writing statistical analyses reports
Language:HTML6 5 12
reconhub/rfextras
Language:R6 3 02
reconhub/datacomparator
Shiny app for comparing 2 versions of a dataset
Language:R5 3 82
reconhub/simulacr
Helper functions for outbreak simulation
Language:R5 1 02
reconhub/occupancy
WIP - Forecast hospital bed occupancy from data on admissions and length of stay
Language:R4 4 5
reconhub/ESCAIDE_2019_workshop
The website of the R workshops for ESCAIDE 2019
Language:CSS1 4 12
reconhub/introduction-to-r-stegen
Language:HTML1 3 0
reconhub/tasks
1 6 52
reconhub/logo
Logo of the project
6 0
reconhub/meeting-march-2019
Website for the epi-roadmap meeting in March 2019
Language:CSS3 01
reconhub/recondrat
RECON drat repo
1 0
reconhub/task-covid19-api
Language:R2 0
reconhub/task-covid19-webpage
Language:Vue1 1