reconhub/incidence

Issues

• Is it possible to turn an incidence object to a dataframe and use this for plotting?

  #132 opened 2 years ago by kurttaylor
  0

• The cyprees closes automatically when the files are executed. cypress run

  #131 opened 4 years ago by norvinino
  4

• Revert #120 for ggplot2 3.3.2

  #126 opened 4 years ago by zkamvar
  2

• `tibble` outputs for `incidence_fit` objects using broom-like `tidy` and `glance` functions

  #127 opened 4 years ago by avallecam
  1

• plot result incorrect

  #122 opened 5 years ago by angryjinyan
  5

• estimate growth rate r using Poisson glm instead of log-linear model

  #125 opened 4 years ago by ffinger
  4

• incidence supports to fit early epidemic curve with sub-exponential growth?

  #112 opened 6 years ago by caijun
  0

• "Non-zero exit status"

  #124 opened 5 years ago by kyawmyotun
  1

• Strange graphical output for simple epicurve

  #119 opened 5 years ago by gfspiteri
  9

• strange problem in plotting

  #121 opened 5 years ago by robertogattabs
  2

• Forthcoming release of ggplot2 and incidence

  #114 opened 5 years ago by paleolimbot
  0

• incidence objects will drop groupings with zero days

  #117 opened 5 years ago by zkamvar
  0

• Can someone run the numbers against this latest data and publish the projections ?

  #118 opened 5 years ago by bochen2027
  1

• Add option to calculate/plot rolling averages

  #105 opened 6 years ago by zkamvar
  7

• "Count over time" vs "incidence rate"

  #102 opened 6 years ago by jakobschumacher
  8

• Restructure incidence object as data frame to allow for facetting

  #104 opened 6 years ago by thibautjombart
  11

• Add example of using border color to show zero cases

  #115 opened 5 years ago by zkamvar
  3

• Function that returns data.frame

  #113 opened 5 years ago by ffinger
  2

• Group hierarchies

  #76 opened 5 years ago by zkamvar
  3

• Error in is.finite(x) : default method not implemented for type 'list'

  #86 opened 6 years ago by caijun
  22

• Allow for multi-day/week/month intervals

  #67 opened 6 years ago by zkamvar
  0

• Add epiweek for interval option

  #89 opened 6 years ago by aspina7
  1

• Propose not to override `standard` argument while defining a non-NULL `first_date`

  #87 opened 6 years ago by caijun
  6

• Error in R 3.6.0 due to `sample()`

  #107 opened 6 years ago by zkamvar
  0

• Show demo in plot customisation vignette on updating number of breaks

  #103 opened 6 years ago by zkamvar
  0

• Travis no longer uploading test results

  #97 opened 6 years ago by zkamvar
  1

• problems with plotting POSIXt incidence + fit objects

  #99 opened 6 years ago by zkamvar
  8

• re-create vdiffr tests for vdiffr version 0.3.0

  #96 opened 6 years ago by zkamvar
  0

• stegen not converting dates

  #88 opened 6 years ago by thibautjombart
  1

• Tests randomly failing for cached objects

  #95 opened 6 years ago by zkamvar
  2

• Fitting log-linear model to incidence curve gives different results for Date and POSIXct inputs to incidence()

  #91 opened 6 years ago by jrcpulliam
  0

• r estimates from fit() are different when same data are estimated separately or as groups

  #93 opened 6 years ago by jrcpulliam
  1

• Add the possibility to add extra information on special dates

  #83 opened 6 years ago by jakobschumacher
  1

• scale_fill_manual() drains incidence curves of their color when groups not present

  #84 opened 6 years ago by pbkeating
  28

• Warn if (max(date) - min(date)) > 50 years?

  #81 opened 6 years ago by dirkschumacher
  1

• give a better error when subsetting groups that don't exist

  #82 opened 6 years ago by zkamvar
  0

• Request feature: I want more coffee

  #80 opened 6 years ago by thibautjombart
  3

• incidence initializer does not respect factor levels for groups

  #78 opened 6 years ago by zkamvar
  0

• plot.incidence does not take column order into account

  #77 opened 6 years ago by zkamvar
  0

• Add support for plotting surveillance algorithms

  #75 opened 6 years ago by dirkschumacher
  1

• Error using first_date and group at the same time

  #70 opened 6 years ago by mfaber
  2

• flexible position of tickmarks on x-axis

  #69 opened 6 years ago by mfaber
  0

• Allow peak estimation across groups

  #66 opened 6 years ago by zkamvar
  0

• estimate_peak fails for non-date incidence

  #63 opened 6 years ago by zkamvar
  0

• Submit to CRAN

  #62 opened 6 years ago by zkamvar
  1

• Ensure fit.incidence works with intervals set as character strings

  #49 opened 6 years ago by zkamvar
  1

• Set all character string interval bins to start of interval

  #53 opened 6 years ago by zkamvar
  0

• Add accessors

  #54 opened 6 years ago by zkamvar
  0

• rename option `iso_weeks` to `iso`

  #55 opened 6 years ago by zkamvar
  8

• add first_date to options for incidence

  #56 opened 6 years ago by zkamvar
  0