/picard

A set of tools (in Java) for working with next generation sequencing data in the BAM (http://samtools.github.io/hts-specs) format.

Primary LanguageJava

Build Status

A set of Java command line tools for maniuplating high-throughput sequencing data (HTS) data and formats.

Picard is implemented using the HTSJDK Java libraryHTSJDK, supporting acce accessing of common file formats, such as SAM and VCF, used for high-throughput sequencing data.

Please see the Picard Documentation for more information.