rhiju

Long-standing RNA enthusiast

Stanford University School of Medicine

Pinned Repositories

codon_riboswitch
Language:Jupyter Notebook0 1 00
condensing_macromolecules
Simulations of biomolecule condensation for Stanford BIOC/BIOP/SBIO/BIOE 241
Language:Rich Text Format0 1 00
cryoEM_simulations
MATLAB Simulations to explore RNA CryoEM
Language:MATLAB0 1 00
loop_close
Scripts used to derive 6D potential for RNA loop_close
Language:Scala2 1 00
matlab_scripts
collection of useful matlab scripts
Language:Matlab0 1 00
rhiju_python
Rhiju Das' python scripts from https://svn.rosettacommons.org/source/workspaces/rhiju/python
Language:Python0 220 03
rna_lores2
Sandbox: lo-res potential for RNA 3D modeling
Language:Jupyter Notebook0 1 00
ToyFold-1D-directed
Testing calculations for simple Toyfold RNA folding model in 1D
Language:MATLAB0 0 00
toyfold2_rhiju
2D model for testing convolution calculations
Language:MATLAB0 1 00
toyfold3
RNA convolutions, ensembles, free energies in 3D
Language:Jupyter Notebook5 1 01

rhiju's Repositories

rhiju/toyfold3
RNA convolutions, ensembles, free energies in 3D
Language:Jupyter Notebook5 1 01
rhiju/loop_close
Scripts used to derive 6D potential for RNA loop_close
Language:Scala2 1 00
rhiju/codon_riboswitch
Language:Jupyter Notebook0 1 00
rhiju/condensing_macromolecules
Simulations of biomolecule condensation for Stanford BIOC/BIOP/SBIO/BIOE 241
Language:Rich Text Format0 1 00
rhiju/cryoEM_simulations
MATLAB Simulations to explore RNA CryoEM
Language:MATLAB0 1 00
rhiju/matlab_scripts
collection of useful matlab scripts
Language:Matlab0 1 00
rhiju/rhiju_python
Rhiju Das' python scripts from https://svn.rosettacommons.org/source/workspaces/rhiju/python
Language:Python0 220 03
rhiju/rna_lores2
Sandbox: lo-res potential for RNA 3D modeling
Language:Jupyter Notebook0 1 00
rhiju/ToyFold-1D-directed
Testing calculations for simple Toyfold RNA folding model in 1D
Language:MATLAB0 0 00
rhiju/toyfold2_rhiju
2D model for testing convolution calculations
Language:MATLAB0 1 00