/ML_genetic_risk

Packages for Genetic risk estimation

Primary LanguageJupyter NotebookMIT LicenseMIT

Machine Learning based Genetic Risk Estimation

This repository contains a number of packages and classes I wrote to perform genetic risk esitmation. It currently contains methods and classes to transform plink files to sample-major format as well as ways to read these binary files efficiently. In addition it contains PyTorch and TF classes to perform NN and penalized regressions.

This is a work in process repository and not itendent for others. At least for now.