roanvanscheppingen

Pinned Repositories

SpaNorm
R package for normalisation of spatial transcriptomics data
Language:R9 3 61
proseg
Probabilistic cell segmentation for in situ spatial transcriptomics
Language:Rust48 6 463
CellChat
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics
Language:R325 2 27154
CosMx-Cell-Profiles
Language:R7 4 31
InSituType
An R package for performing cell typing in SMI and other single cell data
Language:HTML32 8 14911
ncov
Nextstrain build for novel coronavirus SARS-CoV-2
Language:Python1.4k 76 422403
CosMx-Cell-Profiles
Language:R0 0 00
home
0 2 00
seurat
R toolkit for single cell genomics
Language:R2.3k 76 8.1k924
Stereopy
A toolkit of spatial transcriptomic analysis.
Language:Jupyter Notebook213 10 26965

roanvanscheppingen's Repositories

roanvanscheppingen/CosMx-Cell-Profiles
Language:R0 0 00
roanvanscheppingen/home
0 2 00